Pairwise Alignments

Query, 400 a.a., 2-methylaconitate cis-trans isomerase PrpF from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., probable AcnD-accessory protein PrpF from Pseudomonas stutzeri RCH2

 Score =  565 bits (1455), Expect = e-165
 Identities = 274/390 (70%), Positives = 324/390 (83%), Gaps = 3/390 (0%)

Query: 5   VPQIRIPATYMRGGTSKGVFFRLNDLPLEAQLPGAARDALLLRVIGSPDPYGKQIDGMGG 64
           V Q+RIPATYMRGGTSKGVFFRL DLP   Q+PGAARD L +RVIGSPDPY   IDGMGG
Sbjct: 4   VSQVRIPATYMRGGTSKGVFFRLQDLPESCQVPGAARDKLFMRVIGSPDPYSAHIDGMGG 63

Query: 65  ATSSTSKTVIVSASSRTDHDVDYLFGQVAIDKPFVDWSGNCGNLSAAVGPFAIHAGLIPA 124
           ATSSTSK VI+S S+R DHDV+YL+GQV+IDKPFVDWSGNCGNLS   G FA+HAGL+ A
Sbjct: 64  ATSSTSKCVILSKSTRPDHDVEYLYGQVSIDKPFVDWSGNCGNLSTGAGAFALHAGLVDA 123

Query: 125 ECIPHNGVVAVKVWQVNISKTIVVHVPIVNGAVQECGEFELDGVTFAAAEVQVDFVDPAD 184
           E IP NG   V++WQ NI KTI+ HVP+ +G  QE G+FELDGVTF AAE+ ++F+DP+D
Sbjct: 124 ERIPQNGTCVVRIWQANIGKTIIAHVPVTDGQAQETGDFELDGVTFPAAEIVLEFLDPSD 183

Query: 185 DS---GAMFPTGNVMDDLQVPGIGTLNATFINSGIPTIFVDAEALGYQGTELQEAINSDP 241
           D    G+MFPTGN++D+L+VPG+GTL AT I++GIPT+FV+AE +GYQGTEL+E IN +P
Sbjct: 184 DGEEGGSMFPTGNLVDELEVPGVGTLKATMISAGIPTVFVNAEDIGYQGTELREDINGNP 243

Query: 242 QALAKFETLRAYGALKMGLIERIEEAQNRQHTPKIAFVSGAKSYLASSGKRVEADSVDLL 301
           +ALA+ E +R  GAL+MGLI+  EEA  RQHTPK+AFVS  KSY ASSGK ++A  VDLL
Sbjct: 244 EALARLEAIRVAGALRMGLIKTAEEALTRQHTPKVAFVSRPKSYRASSGKTIDAAEVDLL 303

Query: 302 VRALSMGKLHHAMMGTAAVAIASAAAVPGTLVNLAAGGGERTSVTFGHPSGTLKVGAKAK 361
           VRALSMGKLHHAMMGT AVAI +AAAVPGTLVNLAAGGGER +V FGHPSGTL+VGA+AK
Sbjct: 304 VRALSMGKLHHAMMGTCAVAIGTAAAVPGTLVNLAAGGGERQAVRFGHPSGTLRVGAEAK 363

Query: 362 QGKQGWQIERAIMSRSARILMEGWVRVPAN 391
           Q    W + +AIMSRSAR+LMEGWVRVP +
Sbjct: 364 QVDGQWTVTKAIMSRSARVLMEGWVRVPGD 393