Pairwise Alignments

Query, 400 a.a., 2-methylaconitate cis-trans isomerase PrpF from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., tramsmembrane protein from Sinorhizobium meliloti 1021

 Score =  181 bits (458), Expect = 4e-50
 Identities = 124/380 (32%), Positives = 199/380 (52%), Gaps = 38/380 (10%)

Query: 10  IPATYMRGGTSKGVFFRLNDLPLEAQLPGAARDALLLRVIGSPDPYGKQIDGMGGATSST 69
           I    MRGGTSKG +F  +DLP +A      RD LLLR++GSPDP  +QIDG+GGA   T
Sbjct: 6   IACMMMRGGTSKGAYFLADDLPADA----GERDRLLLRIMGSPDP--RQIDGIGGADPLT 59

Query: 70  SKTVIVSASSRTDHDVDYLFGQVAIDKPFVDWSGNCGNLSAAVGPFAIHAGLIPAECIPH 129
           SK  +V AS+R D DVD+LF QV +D+  V  S NCGN+ A VG FA+  GL+ A     
Sbjct: 60  SKVAVVRASARPDFDVDFLFLQVFVDQALVSDSQNCGNILAGVGAFAVERGLVEAA---- 115

Query: 130 NGVVAVKVWQVNISKTIVVHVPIVNGAVQECGEFELDGVTFAAAEVQVDFVDPADDS-GA 188
            G  A++++  N S++ V  +   NG     G+  +DGV   AA V + F D A  S GA
Sbjct: 116 EGETAIRIYMENTSQSAVARIRTANGRPVYAGDASIDGVPTPAAPVYLTFTDAAGSSCGA 175

Query: 189 MFPTGNVMDDLQVPGIGTLNATFINSGIPTIFVDAEALGYQGTELQEAINSDPQALAKFE 248
           + PTG+  ++++  G+     T I++G+P + + A   G  G E +E + ++    A+ E
Sbjct: 176 LLPTGSAANEIE--GVA---CTLIDNGMPVVVMRAADFGLTGYESREELEANESVKARIE 230

Query: 249 TLRAYGALKMGLIERIEEAQNRQHTPKIAFVSGAKSYLASSGKRVEADSVDLLVRALSMG 308
            +R      M L + ++++      PK+  V+            +  +   ++ R+    
Sbjct: 231 RIRLAAGPLMNLGDVMKKS-----VPKMTLVA------------LPVNGGAIMTRSFIPH 273

Query: 309 KLHHAMMGTAAVAIASAAAVPGT-LVNLA-AGGGERTSVTFGHPSGTLKVGAKAKQGKQG 366
           ++H ++    A+++A+A  +P +   +LA    GE  +V   HP+G +++  +       
Sbjct: 274 RVHASIGVFGALSVATACLLPNSPAASLAILPEGEEKTVAVEHPTGRMEILLRL---DNA 330

Query: 367 WQIERAIMSRSARILMEGWV 386
             +E     R+AR L +G V
Sbjct: 331 GSVEECSFLRTARKLFDGRV 350