Pairwise Alignments

Query, 400 a.a., 2-methylaconitate cis-trans isomerase PrpF from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  553 bits (1426), Expect = e-162
 Identities = 277/391 (70%), Positives = 323/391 (82%), Gaps = 7/391 (1%)

Query: 6   PQIRIPATYMRGGTSKGVFFRLNDLPLEAQLPGAARDALLLRVIGSPDPYGKQIDGMGGA 65
           PQIRIPATYMRGGTSKGVFFRL+DLP  A++PGA RDALLLRVIGSPDPYGK  DGMGGA
Sbjct: 4   PQIRIPATYMRGGTSKGVFFRLDDLPEAARVPGAERDALLLRVIGSPDPYGKHTDGMGGA 63

Query: 66  TSSTSKTVIVSASSRTDHDVDYLFGQVAIDKPFVDWSGNCGNLSAAVGPFAIHAGLIPAE 125
           TSSTSK VI++ SS   HDVDYL+GQV+ID  FVDWSGNCGNLS A G FAIHAGL+ A 
Sbjct: 64  TSSTSKCVIMNKSSVPGHDVDYLYGQVSIDTAFVDWSGNCGNLSTAAGAFAIHAGLVDAS 123

Query: 126 CIPHNGVVAVKVWQVNISKTIVVHVPIVNGAVQECGEFELDGVTFAAAEVQVDFVDPAD- 184
            +P NG+  V++WQ NI KTI+ HVP+ NG VQE G+FELDGVTF AAE+ ++FVDPAD 
Sbjct: 124 RVPENGICEVRIWQANIGKTIIAHVPVTNGEVQETGDFELDGVTFPAAEIVLEFVDPADD 183

Query: 185 --DSGAMFPTGNVMDDLQVPG----IGTLNATFINSGIPTIFVDAEALGYQGTELQEAIN 238
             D GAMFPTGN++D+L+VP      G + AT IN+GIPTIFV+AE LGY+G ELQEAIN
Sbjct: 184 GEDGGAMFPTGNLVDELEVPSEVHPSGKIRATLINAGIPTIFVNAEDLGYRGDELQEAIN 243

Query: 239 SDPQALAKFETLRAYGALKMGLIERIEEAQNRQHTPKIAFVSGAKSYLASSGKRVEADSV 298
            +P ALA FE LRA+GA++MGLI+ ++EA+ RQHTPK+AFV+   +++ SSGK V  D V
Sbjct: 244 GNPVALAMFEQLRAHGAIRMGLIKTLDEAKTRQHTPKVAFVTNPMTHVVSSGKTVAEDEV 303

Query: 299 DLLVRALSMGKLHHAMMGTAAVAIASAAAVPGTLVNLAAGGGERTSVTFGHPSGTLKVGA 358
           DLLVRALSMGKLHHAMMGTAAVAI +AAA+PGTLVNLAAGGGER +V FGHPSGTL+VGA
Sbjct: 304 DLLVRALSMGKLHHAMMGTAAVAIGTAAAIPGTLVNLAAGGGERQAVRFGHPSGTLRVGA 363

Query: 359 KAKQGKQGWQIERAIMSRSARILMEGWVRVP 389
           +AKQ    W + +AIMSRSARILMEG VRVP
Sbjct: 364 EAKQVDGQWTVTKAIMSRSARILMEGTVRVP 394