Pairwise Alignments

Query, 400 a.a., 2-methylaconitate cis-trans isomerase PrpF from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., putative AcnD-accessory protein PrpF (RefSeq) from Shewanella loihica PV-4

 Score =  567 bits (1461), Expect = e-166
 Identities = 279/383 (72%), Positives = 323/383 (84%)

Query: 7   QIRIPATYMRGGTSKGVFFRLNDLPLEAQLPGAARDALLLRVIGSPDPYGKQIDGMGGAT 66
           Q++IPATYMRGGTSKGVFF L DLPL AQ PG ARDALLLRVIGSPDPYGKQ DGMGGAT
Sbjct: 3   QMKIPATYMRGGTSKGVFFALKDLPLNAQQPGPARDALLLRVIGSPDPYGKQTDGMGGAT 62

Query: 67  SSTSKTVIVSASSRTDHDVDYLFGQVAIDKPFVDWSGNCGNLSAAVGPFAIHAGLIPAEC 126
           SSTSKTVI+  S R DHDVDYLFGQVAIDKPFVDWSGNCGNL+AAVG FAI  GL+ +  
Sbjct: 63  SSTSKTVILDKSQRDDHDVDYLFGQVAIDKPFVDWSGNCGNLTAAVGAFAITQGLVDSAK 122

Query: 127 IPHNGVVAVKVWQVNISKTIVVHVPIVNGAVQECGEFELDGVTFAAAEVQVDFVDPADDS 186
           IP NG+  VK+WQ NI+KTI+ HVP+V+G VQE G+FELDGVTF AAEV V+FVDPAD  
Sbjct: 123 IPDNGIAVVKIWQANINKTIIAHVPMVDGEVQELGDFELDGVTFPAAEVLVEFVDPADGE 182

Query: 187 GAMFPTGNVMDDLQVPGIGTLNATFINSGIPTIFVDAEALGYQGTELQEAINSDPQALAK 246
           G MFPTGN++D L+VPG    +ATFIN+GIPTIF+ AE LGY+GTELQEAIN D  AL +
Sbjct: 183 GDMFPTGNLVDKLEVPGEPVFDATFINAGIPTIFLKAEQLGYEGTELQEAINGDAAALER 242

Query: 247 FETLRAYGALKMGLIERIEEAQNRQHTPKIAFVSGAKSYLASSGKRVEADSVDLLVRALS 306
           FET+RA+GAL+MGLI+ ++EA  RQHTPKIAFV+ AK+Y +SSGK++ A+ +DL VRALS
Sbjct: 243 FETIRAHGALQMGLIQSLDEAAGRQHTPKIAFVAPAKAYTSSSGKQIAAEEIDLHVRALS 302

Query: 307 MGKLHHAMMGTAAVAIASAAAVPGTLVNLAAGGGERTSVTFGHPSGTLKVGAKAKQGKQG 366
           MGKLHHAMMGTAAVAI +AA++PGTLVN AAGG  R SV FGHPSGTLKVGAKA + +  
Sbjct: 303 MGKLHHAMMGTAAVAIGTAASIPGTLVNQAAGGQARESVRFGHPSGTLKVGAKASEQEGR 362

Query: 367 WQIERAIMSRSARILMEGWVRVP 389
           WQ+E+  MSRSAR+LM+GWV VP
Sbjct: 363 WQVEKVSMSRSARVLMQGWVCVP 385