Pairwise Alignments

Query, 308 a.a., methylisocitrate lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., methylisocitrate lyase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  380 bits (975), Expect = e-110
 Identities = 193/296 (65%), Positives = 231/296 (78%), Gaps = 6/296 (2%)

Query: 11  MSLSPGAKFRLAVKTHHPLQIVGTINPYCAMMAKSIGHQAIYLSGGGIANASYGLPDLGI 70
           M+ S G +FR A+    PLQIVGT N Y A+MA+  G QA+YLSG G+ANASYGLPDLG+
Sbjct: 1   MTQSAGLRFRQALANSKPLQIVGTTNAYFALMAEQTGFQALYLSGAGVANASYGLPDLGM 60

Query: 71  TTLNDVLVDVERITNACDLPLLVDIDTGFGGAFNIARTIKAMEKAGAAAVHMEDQVAQKR 130
           T++NDVL+D  RIT+A  LPLLVDIDTG+GGAFNIARTIK  EK G AAVHMEDQV+QKR
Sbjct: 61  TSMNDVLIDAGRITSATQLPLLVDIDTGWGGAFNIARTIKEFEKIGVAAVHMEDQVSQKR 120

Query: 131 CGHRPNKAIVSQQEMVDRVKAAVDARINPEFVIMARTDALAVEGMDSAIERAIACVEAGA 190
           CGHRPNKA+VS +EMVDR+KAAVDAR +P FVIMARTDA+AVEG+++ IERA A + AGA
Sbjct: 121 CGHRPNKAVVSTEEMVDRIKAAVDARTDPNFVIMARTDAVAVEGLEAGIERAKAYIAAGA 180

Query: 191 DMIFPEAMTELKQYEQFSTALRSATGKPVPILANITEFGQTPLYSGEQLAAVNVDMVLYP 250
           DMIF EA+TEL QY  F   +++      PILAN+TEFGQT L++ E+LA    DMVLYP
Sbjct: 181 DMIFAEALTELDQYRHFKAQVKA------PILANMTEFGQTQLFNKEELAQAGADMVLYP 234

Query: 251 LSAFRAMNKAAENVYRHLLEHGNQEALLDQMQTRKELYAYLHYHEYEDKLDQLFSQ 306
           L  FRA N+AA  V + L+  G+Q  +LD MQTR +LY YL YH +EDKLDQLFSQ
Sbjct: 235 LGTFRAANQAALKVMQALMNDGHQRNVLDTMQTRADLYKYLGYHAFEDKLDQLFSQ 290