Pairwise Alignments

Query, 235 a.a., GntR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 233 a.a., GntR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  184 bits (466), Expect = 2e-51
 Identities = 107/229 (46%), Positives = 146/229 (63%), Gaps = 8/229 (3%)

Query: 4   SSPLVRQA-STEKESTKSENLTEYLIEAI----VEGQLAPGSKISEPELAKQFQVSRGPL 58
           S P+   A ST    T +  L +  ++AI    ++G+LAPGSKI+E  LA+++ +SRGP 
Sbjct: 2   SKPMALDALSTLDTETPALTLADKALQAIQTSIIKGELAPGSKINEQMLAQRYGISRGPT 61

Query: 59  REALMRVEGLGLIERIPHIGARVIQLSPTKLVELYAVREALEGMAARLAARNITEIELAG 118
           REAL+ +E   L+ RIPH+GARV QLS  +L +LY +R  LEGMA  LAA++IT   L  
Sbjct: 62  REALLTLERRRLVVRIPHVGARVAQLSIDELNDLYRLRSVLEGMACELAAKHITPTALMQ 121

Query: 119 LESLLSTHSTHIDQVEGASYFHQQGDFDFHYRIIQACRNQQLIGLLCDELYHLLRMYRYQ 178
           L+ L+ +    +   +G +YF Q GD DFHYRII+A  ++ L   L   LYHLLRMYRYQ
Sbjct: 122 LQRLMDSQEAAL--AKGDTYFQQDGDVDFHYRIIRASGSRHLQETLIGNLYHLLRMYRYQ 179

Query: 179 SPRSHSRPVEALEEHKFILRAIRQRDEELAEMLMRRHISRSRQLIEQQI 227
              S SRP  A+ EH+ I+ AI   D ELA +LMRRHI + R   E+++
Sbjct: 180 C-TSESRPTRAIAEHRRIVEAIAAGDGELASLLMRRHIEQGRINTEKRL 227