Pairwise Alignments

Query, 235 a.a., GntR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 223 a.a., transcriptional regulator, GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 81.3 bits (199), Expect = 1e-20
 Identities = 66/235 (28%), Positives = 114/235 (48%), Gaps = 19/235 (8%)

Query: 1   MMKSSPLVRQASTEKESTKSENLTEYLIEAIVEGQLAPGSKISEPELAKQFQVSRGPLRE 60
           M +++P+V +       T+++ + E L E I+ G++A G  + +  LA+   VSR P+RE
Sbjct: 1   MSRTTPIVHK-------TRTQLVVEVLREKILSGEIAAGEPLRQTALAEALHVSRIPVRE 53

Query: 61  ALMRVEGLGLIERIPHIGARVIQLSPTKLVELYAVREALEGMAARLAARNITEIELAGLE 120
           AL+++E  GL++  PH GA   +LS  ++ EL+ +R  +E      A   +   +L   E
Sbjct: 54  ALLQLEAEGLVKFEPHKGATATELSVAQVTELFELRAMIETDLLAKAIPQLQAEDLIKAE 113

Query: 121 SLLSTHST---HIDQVEGASYFHQQGDFDFHYRIIQACRNQQLIGLLCDELYHLLRMYRY 177
            +L    +   H D V   S  + Q    FH  + QA      + ++     +  R  R 
Sbjct: 114 RVLEQLESAFKHEDAVASWSELNTQ----FHTCLYQAANRPHTLEVVHGLNTNCDRYIRL 169

Query: 178 QSPRSHSRPVEALEEHKFILRAIRQRDEELAEMLMRRHISRS----RQLIEQQIM 228
           Q   +   P  A  EH+ +L   +QR+ E A  L+R HI  +    R L+ +Q++
Sbjct: 170 QLLLAGGIPA-AEHEHRELLNYCKQRETEKATALLRHHILHAATTIRDLVAKQVV 223