Pairwise Alignments

Query, 235 a.a., GntR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 238 a.a., transcriptional regulator. GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  190 bits (482), Expect = 2e-53
 Identities = 105/222 (47%), Positives = 149/222 (67%), Gaps = 4/222 (1%)

Query: 8   VRQASTEKESTK-SENLTEYLIEAIVEGQLAPGSKISEPELAKQFQVSRGPLREALMRVE 66
           V+  ++EK ST  ++ +   +  +I++G+L  GSKI+E  LA+++ +SRGP REAL  +E
Sbjct: 4   VKSLASEKSSTTLADQILVQIQTSIIKGELPAGSKINEQALAEKYGISRGPTREALQTLE 63

Query: 67  GLGLIERIPHIGARVIQLSPTKLVELYAVREALEGMAARLAARNITEIELAGLESLLSTH 126
              L+ R PH+GARV QL+ ++L +LY +R  LEGMA  LAA  IT  +LA LE LL+  
Sbjct: 64  RQRLVVRAPHVGARVAQLTVSELNDLYQLRSVLEGMACELAASRITPEQLAKLEDLLAVQ 123

Query: 127 STHIDQVEGASYFHQQGDFDFHYRIIQACRNQQLIGLLCDELYHLLRMYRYQSPRSHSRP 186
            T +    G +YF ++GD DFHY+IIQA  N+ L   L   LYHLLRMYRYQ   + +RP
Sbjct: 124 ETAL--ANGDTYFQEEGDVDFHYQIIQASGNKHLQETLIGGLYHLLRMYRYQC-TNKNRP 180

Query: 187 VEALEEHKFILRAIRQRDEELAEMLMRRHISRSRQLIEQQIM 228
           V+A+ EH+ I+ AI QRD ELA +LMRRHI + R+  E +++
Sbjct: 181 VKAIAEHRRIVEAIAQRDGELASLLMRRHIEQGRKNTELRLI 222