Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., Tricarboxylate transport protein TctC from Pseudomonas fluorescens FW300-N2E2

 Score =  144 bits (363), Expect = 3e-39
 Identities = 105/328 (32%), Positives = 158/328 (48%), Gaps = 13/328 (3%)

Query: 8   SLTAAMLAA---TFSFSSLAADLEKI----HFIVPGGAGGGWDMTARATGDALMKAKLVG 60
           SL    LAA    F+   LAAD  K       I P   GGG+D+T +    AL+  KL+ 
Sbjct: 4   SLRKVALAAGCLMFAGQLLAADPSKEPKRPECIAPASPGGGFDLTCKLAQSALVNQKLLT 63

Query: 61  NASYQNLSGGGGGKAIAHLIETADRQQD--TLMINSTPIVIRSLSGVFPQSFRDLTP-VA 117
                    GG G A+A+    A R  D  TL+  S+  ++    G F +        +A
Sbjct: 64  KPMRVTYMPGGVG-AVAYNAVVAQRPADAGTLVAWSSGSLLNLAQGKFGRFDESAVRWLA 122

Query: 118 EIVSDYGAFVVAGDSKYTSWEQVVADFKANPKQIKIAGGSARGSMDHLVAAAAFKGQGLD 177
            + + YGA  V  DS Y + + +V   K +P  + I  G   GS D +  A   K  G++
Sbjct: 123 AVGTSYGAIAVKSDSPYKNLDDLVQALKKDPGSVVIGSGGTVGSQDWMQTALIAKAAGIN 182

Query: 178 PKEVRYVAYDAGGSAMTALLSGETQVLSTGLGEVLEMSKSGQVRVLAITSPKRLD--IAP 235
           P+++RYVA + GG   TALL G  QV ST + + +   +SG +R+LA+ + KR+D     
Sbjct: 183 PRDLRYVALEGGGEIATALLGGHIQVGSTDISDSMPHIQSGDMRLLAVFAEKRIDEPEMK 242

Query: 236 DIPTLADYGNPTTFVNWRGYFAAPGVSAEKVAEWNEVFKKMFASEEWKVIRDRNGWIDSY 295
           DIPT  + G    +   RG++  P VS E  A W + F K+ ASEE+  +RD+       
Sbjct: 243 DIPTAKEQGYDIVWPVVRGFYLGPKVSDEDYAWWKDAFDKLLASEEFAKLRDQRELFPFA 302

Query: 296 KGDKEFYAFLEEQEKQMGDLMRELGFLK 323
               E  A++++Q      L +E G ++
Sbjct: 303 MTGPELDAYVKKQVADYKVLAKEFGLIQ 330