Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., Tricarboxylate transport protein TctC (from data) from Dinoroseobacter shibae DFL-12

 Score =  335 bits (858), Expect = 1e-96
 Identities = 165/324 (50%), Positives = 223/324 (68%), Gaps = 3/324 (0%)

Query: 2   LKFFKPSLTAAMLAATFSFSSLAAD---LEKIHFIVPGGAGGGWDMTARATGDALMKAKL 58
           L+F + +L AA  A   +  + A     LE IHF++PGGAGGGWD TAR TG+AL KA L
Sbjct: 3   LEFTRRTLIAAAAALAMTGGAHAEGEQMLESIHFLIPGGAGGGWDGTARGTGEALTKAGL 62

Query: 59  VGNASYQNLSGGGGGKAIAHLIETADRQQDTLMINSTPIVIRSLSGVFPQSFRDLTPVAE 118
           VG+ASY+N+SGGGGGKAIA+LIE A+    TLM+NSTPIVIRSL+G   QSFRDLT VA 
Sbjct: 63  VGSASYENMSGGGGGKAIAYLIENANSSHGTLMVNSTPIVIRSLTGEISQSFRDLTLVAG 122

Query: 119 IVSDYGAFVVAGDSKYTSWEQVVADFKANPKQIKIAGGSARGSMDHLVAAAAFKGQGLDP 178
            + DY A VV  DS   S   ++A + A+P    + GGS  G MDHLVAA   +  G D 
Sbjct: 123 TIGDYAAIVVGKDSPINSMADLIAAYDADPNATAVGGGSVPGGMDHLVAAMVMEAAGKDA 182

Query: 179 KEVRYVAYDAGGSAMTALLSGETQVLSTGLGEVLEMSKSGQVRVLAITSPKRLDIAPDIP 238
             V+Y+ YDAGG AM ALLSGE   LSTG  E ++++++G+V+++ +T+P+R+      P
Sbjct: 183 LGVKYIPYDAGGKAMAALLSGEIAALSTGFSEAIDLAEAGEVKIIGVTAPERVAAYDSAP 242

Query: 239 TLADYGNPTTFVNWRGYFAAPGVSAEKVAEWNEVFKKMFASEEWKVIRDRNGWIDSYKGD 298
           T+ + G  TTFVNWRG+FAAPG+  E++A +    +KM+ + EW+ +R RNGW++ +   
Sbjct: 243 TMVEQGIDTTFVNWRGFFAAPGLPEEQLAAYQATLEKMYDTPEWEEVRARNGWVNIHNSG 302

Query: 299 KEFYAFLEEQEKQMGDLMRELGFL 322
            +F +FLE QE Q+GDLM++LGFL
Sbjct: 303 ADFQSFLEAQEAQIGDLMKKLGFL 326