Pairwise Alignments

Query, 509 a.a., tripartite tricarboxylate transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., Uncharacterized protein conserved in bacteria from Pseudomonas stutzeri RCH2

 Score =  324 bits (830), Expect = 5e-93
 Identities = 181/500 (36%), Positives = 288/500 (57%), Gaps = 6/500 (1%)

Query: 1   MLDGILQGLATAVMPTNLMMVMIG-CFVGTFIGMLPGLGPISAIALMIPITYGLEPASGL 59
           ML+ + QG   AV   N++++M+G   VG   G +PGL    A+AL +P+T+ + P +GL
Sbjct: 1   MLELLQQGFG-AVFSLNILLLMLGGVAVGIVFGAVPGLSATMAVALCLPLTFTMGPQAGL 59

Query: 60  ILMAGVYYGAIFGGSTSSILINAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYASFTGG 119
            L+  ++ GA  GG  S+IL+  PG  S++ T FDG P+ ++G   KAL +    SF G 
Sbjct: 60  SLLVALFIGATSGGLISAILLKIPGTPSSIATVFDGGPLMEQGMGVKALGVGIVFSFLGT 119

Query: 120 TLSAIMLLFAAPALAKVSLSFQSSDYFALMLVGLSAVAAFAGKGQVIKAWMMTVLGLMLS 179
             S I L+F AP LAKV+LSF   +YFA+ +  L+ +A  +  G ++K      LG+ +S
Sbjct: 120 IFSIIALMFIAPQLAKVALSFGPHEYFAIAVFSLTLIATLSA-GSMVKGLFAGTLGIAVS 178

Query: 180 TVGIDKGIGVERFTFGLTDLMDGFSFLLLAMATFALGETL-MGILKPDADNSANEQEQMK 238
           TVGI     V RFTFG+++L  GFS L + +  FA+ E + +      A  +      MK
Sbjct: 179 TVGIAPVEAVRRFTFGVSELNGGFSMLTVMIGMFAVAEVIKLAETGRHAVRNKAGSVSMK 238

Query: 239 NIGSMKLTKEEVKEAAPVSLRSSILGFFTGVLPGAGATIAAFLAYGMERNLAPKAKKEEF 298
            I     + +E ++  P + RS ++G   G+LPG GA  +  L+Y + +  A +   E +
Sbjct: 239 QIKGFGFSLKEFRQELPNATRSGLIGLAVGILPGIGAGTSNLLSYIVAKKRAKQP--ETY 296

Query: 299 GQGSLRGLVAPESANNAASSGSFVPLLTLGIPGSGTTAIMLGALIAYGIQPGPRLFVDHP 358
           G+G++ G+VA E+ANNA   G+ +PL+TLGIPG  TTAI+LG  + +GIQPGP LF+   
Sbjct: 297 GKGNIGGVVASETANNAGIGGAMMPLMTLGIPGDTTTAILLGGFLIHGIQPGPLLFISQG 356

Query: 359 DIFWSVIISMYVGNIVLLILNLPLIPYISKLLAVPRTVLLPMILFFSITGVYLVSFNTMD 418
            + +++  ++ V ++++L +    +    KLL VP+ +LLP+IL   + G + +S    D
Sbjct: 357 PLVYTIFAALLVASVMMLFMEFYGLRLFIKLLDVPKHILLPIILVLCVVGAFGLSSRLFD 416

Query: 419 VYVMILVAMGAIALRLANFPLAPLLLGFILGGLMEENLRRALIITDGEISFLWERPITLA 478
           V+ ++L  +       A  P+AP ++GFILG + E NLRR L+++DG  +  +  PI   
Sbjct: 417 VWSILLFGVLGYGFVKAGMPVAPFIIGFILGPMAETNLRRGLMLSDGNFASFFTNPIAAT 476

Query: 479 FTVLAIVTLLSPLFGRLMER 498
           F  LA+  +L  L+  +  R
Sbjct: 477 FLGLALAFVLWQLYSAMRPR 496