Pairwise Alignments

Query, 509 a.a., tripartite tricarboxylate transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 504 a.a., Protein of unknown function DUF112 from Pseudomonas syringae pv. syringae B728a

 Score =  431 bits (1108), Expect = e-125
 Identities = 228/501 (45%), Positives = 324/501 (64%), Gaps = 10/501 (1%)

Query: 7   QGLATAVMPTNLMMVMIGCFVGTFIGMLPGLGPISAIALMIPITY--GLEPASGLILMAG 64
           QG   A+ P NL+  + G  +GT +G+LPGLGPI+ +AL+IPI +  GL P S LIL+A 
Sbjct: 9   QGFGVALTPYNLITALCGTLIGTVVGLLPGLGPINGVALLIPIAFALGLPPESALILLAA 68

Query: 65  VYYGAIFGGSTSSILINAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYASFTGGTLSAI 124
           VY G  +GG  SSIL+N PG +STV+T  DGYPMA++G AG AL+L+A++SF G  ++  
Sbjct: 69  VYLGCEYGGRISSILLNIPGEASTVMTTLDGYPMARQGLAGVALSLSAWSSFIGAFIATC 128

Query: 125 MLLFAAPALAKVSLSFQSSDYFALMLVGLSAVAAFAGKGQVIKAWMMTVLGLMLSTVGID 184
            ++  AP LAK +++F  ++YF LM+  +  +   AG  + +K ++  ++GL LS VGID
Sbjct: 129 GMVLFAPLLAKWAIAFGPAEYFVLMVFAIVCLGGMAGD-RPLKTFIAALIGLFLSAVGID 187

Query: 185 KGIGVERFTFGLTDLMDGFSFLLLAMATFALGETLMGILKPDADNSANEQEQMKNIGSMK 244
              GV RFT     L DG  F++L +  F++ E L+ + K     +   QE +K  G M 
Sbjct: 188 ANSGVYRFTGDNIHLTDGIQFVVLVLGLFSISEILLLLEK-----THRGQEAVKATGRMM 242

Query: 245 LTKEEVKEAAPVSLRSSILGFFTGVLPGAGATIAAFLAYGMERNLAPKAKKEEFGQGSLR 304
              +E      V++R  +LGF  GVLPGAGAT+A+ +AY  E+ +A    K  FGQG +R
Sbjct: 243 FNVKEAAAVFVVNIRCGLLGFILGVLPGAGATLASAVAYMTEKRIAGAGGK--FGQGDMR 300

Query: 305 GLVAPESANNAASSGSFVPLLTLGIPGSGTTAIMLGALIAYGIQPGPRLFVDHPDIFWSV 364
           GL APE+A  A + G+ VP+LTLG+PGSGTTA+M+GAL  Y I PGP LF   PDI W +
Sbjct: 301 GLAAPETAIGATACGALVPMLTLGVPGSGTTAVMIGALSLYNITPGPMLFQQQPDIVWGL 360

Query: 365 IISMYVGNIVLLILNLPLIPYISKLLAVPRTVLLPMILFFSITGVYLVSFNTMDVYVMIL 424
           I S+++ NI+L+ILN+P+I   +++LAVP   L+P+I   +  GVY V   T D+++M+ 
Sbjct: 361 IASLFIANIMLVILNIPMIRIFTRILAVPNWALVPVIAIITGIGVYAVHATTFDLFLMVG 420

Query: 425 VAMGAIALRLANFPLAPLLLGFILGGLMEENLRRALIITDGEISFLWERPITLAFTVLAI 484
           + +    LR  +FPL+P+LLGFILGGLME+NLRRAL I++GE+  LW  PITL   V+ +
Sbjct: 421 IGIFGYILRKLDFPLSPILLGFILGGLMEQNLRRALSISNGELGILWSSPITLGVWVVTV 480

Query: 485 VTLLSPLFGRLMERKKRPTGA 505
             LL PL     +R K+   A
Sbjct: 481 FMLLFPLLRIWRKRAKQQAAA 501