Pairwise Alignments

Query, 509 a.a., tripartite tricarboxylate transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 505 a.a., putative integral membrane protein from Phaeobacter inhibens DSM 17395

 Score =  280 bits (715), Expect = 1e-79
 Identities = 160/500 (32%), Positives = 273/500 (54%), Gaps = 15/500 (3%)

Query: 2   LDGILQGLATAVMPTNLMMVMIGCFVGTFIGMLPGLGPISAIALMIPITYGLEPASGLIL 61
           ++ +L G         +  ++IG   G  IG +PG+GP  AIA+++P T+  +P  GL +
Sbjct: 1   MENLLAGAEMLARWDVVAALLIGSIGGVVIGAIPGVGPAVAIAILLPATFAFDPIVGLTM 60

Query: 62  MAGVYYGAIFGGSTSSILINAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYASFTGGTL 121
           + G+Y  +++GG+  ++LIN PG +   +T++DG+PM QKG A +AL+LA  ASF GG  
Sbjct: 61  LLGIYGSSMYGGAIPAVLINTPGTAVNALTSYDGHPMTQKGDAHRALSLAYSASFWGGIF 120

Query: 122 SAIMLLFAAPALAKVSLSFQSSDYFALMLVGLSAVAAFAGKGQVIKAWMMTVLGLMLSTV 181
               L+  +P LA V+  F S + F   L+G+  V   A +GQ+  A ++ + G+ L T+
Sbjct: 121 GIGCLILLSPVLALVAPMFGSREIFLAALLGVVLVI-LAHRGQIFAAGVLAMFGIFLQTI 179

Query: 182 GIDKGIGVERFTFGLTDLMDGFSFLLLAMATFALGETLMGILKPDADNSANEQEQMKNIG 241
           G+D     +R+TFGLT L  G + +++ +  FAL +    +  PD     N  +     G
Sbjct: 180 GLDAVTYTQRYTFGLTFLSSGVNLIVVVLGLFALSQAFFLLTTPD-----NSPDAKPVSG 234

Query: 242 SMKLTKEEVKEAAPVSLRSSILGFFTGVLPGAGATIAAFLAYGMERNLAPKAKK--EEFG 299
            M     E+     V+  +S  G   G++PG G   A F++Y      A K  K  + FG
Sbjct: 235 RMSAGIRELMRHKRVATVASGCGVILGMIPGTGEFTAQFMSY----TYAQKTSKTPDLFG 290

Query: 300 QGSLRGLVAPESANNAASSGSFVPLLTLGIPGSGTTAIMLGALIAYGIQPGPRLFVDHPD 359
           +GS  GL+A E+ANNA  + + +PLL LGIPG   TA+ML     + + PGP+LF ++ D
Sbjct: 291 KGSPEGLIASEAANNAVPAAAMIPLLALGIPGEALTAMMLSVFYVHNVIPGPQLFQNNID 350

Query: 360 IFWSVIISMYVGNIVLLILNLPLIPYISKLLAVPRTVLLPMILFFSITGVYLVSFNTMDV 419
           + + + +++ + N++++   +     +++++ +P   L  +IL  S  GVY +  +  D 
Sbjct: 351 LVYGLYLALILLNVIVVAFLMVSTNLLTRIIRIPTRFLGVLILLLSFVGVYSLRNSLTDC 410

Query: 420 YVMILVAMGAIALRLANFPLAPLLLGFILGGLMEENLRRALIITDGEISFLWERPITLAF 479
            +     +  + L+  N P+ P++LG +LGG+ME  LR AL      +  + +RPI  +F
Sbjct: 411 MIAAGFGVLGLILKRLNLPIVPIILGMVLGGIMEVKLRSALPRLKTPLDMI-DRPI--SF 467

Query: 480 TVLAIVTLLSPLFGRLMERK 499
            + A++ L+  L  R + R+
Sbjct: 468 ILFALIVLVLVLHIRALVRE 487