Pairwise Alignments

Query, 509 a.a., tripartite tricarboxylate transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 505 a.a., Tricarboxylate transport membrane protein TctA (from data) from Dinoroseobacter shibae DFL-12

 Score =  572 bits (1473), Expect = e-167
 Identities = 293/505 (58%), Positives = 383/505 (75%), Gaps = 6/505 (1%)

Query: 1   MLDGILQGLATAVMPTNLMMVMIGCFVGTFIGMLPGLGPISAIALMIPITYGL-EPASGL 59
           ML+G+L GL TA    NL MV+ GC +GTFIGMLPGLGP+S IA+MIP+   L +P++ L
Sbjct: 1   MLEGLLIGLQTAFSIQNLAMVIGGCLIGTFIGMLPGLGPMSIIAIMIPVAISLGDPSAAL 60

Query: 60  ILMAGVYYGAIFGGSTSSILINAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYASFTGG 119
           IL+AGVYYGAIFGGSTSSIL+NAPG + TV T+FDGYPMAQ+G+AGKAL +AA ASF GG
Sbjct: 61  ILLAGVYYGAIFGGSTSSILLNAPGVAGTVATSFDGYPMAQQGKAGKALTIAAIASFAGG 120

Query: 120 TLSAIMLLFAAPALAKVSLSFQSSDYFALMLVGLSAVAAFAGKGQVIKAWMMTVLGLMLS 179
           T+ AI+L+  APAL+ V+L F S++YFALM+VGLSA+AAFAG GQV KA +MT+LGL+++
Sbjct: 121 TIGAILLMVFAPALSSVALLFHSAEYFALMVVGLSAIAAFAGTGQVAKALLMTILGLIMA 180

Query: 180 TVGIDKGIGVERFTFGLTDLMDGFSFLLLAMATFALGETLMGILKPDADNSANEQEQMKN 239
           TVG        RFT GL DL  GF F+ LAMA FAL E L  ++ P    S     ++K+
Sbjct: 181 TVGEGALFASPRFTMGLMDLQSGFGFITLAMAMFALPEALFLVMNPLRAASGQGGGEIKD 240

Query: 240 IGSMKLTKEEVKEAAPVSLRSSILGFFTGVLPGAGATIAAFLAYGMERNLAPKAKKEEFG 299
           +   ++T+ E +  APV  R S+ GFF GVLPGAGATIA+FL Y +ERN+A K ++ EFG
Sbjct: 241 L---RITRAEARSIAPVIGRQSVQGFFIGVLPGAGATIASFLGYAVERNIASKDEQAEFG 297

Query: 300 QGSLRGLVAPESANNAASSGSFVPLLTLGIPGSGTTAIMLGALIAYGIQPGPRLFVDHPD 359
           +GS++GL APE+ANNAA +GSFVPLLTLGIPGSGTTAI+LGAL+A  + PGPRL +D P+
Sbjct: 298 KGSVKGLAAPETANNAACTGSFVPLLTLGIPGSGTTAILLGALLALNVSPGPRLMIDAPE 357

Query: 360 IFWSVIISMYVGNIVLLILNLPLIPYISKLLAVPRTVLLPMILFFSITGVYLVSFNTMDV 419
           IFW+VI+SM++GN+VLLILNLPLIPYI+K+L+VPR  L+P ILFF++ G Y+   N  ++
Sbjct: 358 IFWAVIMSMFIGNLVLLILNLPLIPYIAKILSVPRNYLIPFILFFTLMGAYIGQNNATEL 417

Query: 420 YVMILVAMGAIALRLANFPLAPLLLGFILGGLMEENLRRALIITDGEISFLWERPITLAF 479
            +++   + A  L+ A++PLAPLL+GFILGGL+E N  RA+ + DG ISF+WERP+TL  
Sbjct: 418 LLLVGFGICATILKFADYPLAPLLIGFILGGLLENNFSRAMQLYDG-ISFIWERPMTLGL 476

Query: 480 TVLAIVTLLSPLFGRLMERKKRPTG 504
            V+A + ++ P + R    K R  G
Sbjct: 477 LVIAALLIILPSY-RNRRAKARAAG 500