Pairwise Alignments

Query, 509 a.a., tripartite tricarboxylate transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., protein of unknown function DUF112 transmembrane (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  328 bits (840), Expect = 4e-94
 Identities = 170/498 (34%), Positives = 290/498 (58%), Gaps = 8/498 (1%)

Query: 2   LDGILQGLATAVMPTNLMMVMIGCFVGTFIGMLPGLGPISAIALMIPITYGLEPASGLIL 61
           ++ +  GL   + P+ L+++      G  IG LPGL   +  AL++P T  ++P   + +
Sbjct: 1   MEPLFAGLYALMDPSLLVLLFAATLGGVIIGALPGLNATTGAALLLPFTITMDPIPAIAI 60

Query: 62  MAGVYYGAIFGGSTSSILINAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYASFTGGTL 121
           +  +Y  A F G+ ++ILIN PG S++  T  DGYP+AQ+G+AG+AL +A  +S  GG +
Sbjct: 61  LTTIYCAATFAGAITAILINTPGTSASATTCLDGYPLAQRGEAGRALGMATVSSTIGGII 120

Query: 122 SAIMLLFAAPALAKVSLSFQSSDYFALMLVGLSAVAAFAGKGQVIKAWMMTVLGLMLSTV 181
           S + L+ AAP +A+++ +F   +YFAL + G+S +A   G G  +K  +   LG+ L+TV
Sbjct: 121 SVVCLMMAAPLMARMAYNFAPPEYFALTVFGISMLATI-GDGTPLKNIIAGALGVFLATV 179

Query: 182 GIDKGIGVERFTFGLTDLMDGFSFLLLAMATFALGETLMGILKPDADNSANEQEQMKNIG 241
           G D    VERFTFG  +L +G  F+ + +  F + E L+   +  A     E + +K   
Sbjct: 180 GKDLLTTVERFTFGFNELSEGIGFVPVMIGIFGISELLVQAERLQAKRKLIEMKAIK--- 236

Query: 242 SMKLTKEEVKEAAPVSLRSSILGFFTGVLPGAGATIAAFLAYGMERNLAPKAKKEEFGQG 301
               ++E+ ++     LRSS +G F G+LP  GAT+A+ + Y   R  +     EEFG+G
Sbjct: 237 --LPSREDYRKVWRTILRSSGIGTFIGILPAEGATVASMIGYNEARRWSKTP--EEFGKG 292

Query: 302 SLRGLVAPESANNAASSGSFVPLLTLGIPGSGTTAIMLGALIAYGIQPGPRLFVDHPDIF 361
           ++ G+   E+ANN+A+ G+ VP L LGIPGS T A++L  L+ +G+QPGP +F +  +  
Sbjct: 293 AIEGIAGSEAANNSATGGAMVPTLALGIPGSPTAAVILAGLMVHGLQPGPTMFTEQAEFA 352

Query: 362 WSVIISMYVGNIVLLILNLPLIPYISKLLAVPRTVLLPMILFFSITGVYLVSFNTMDVYV 421
           +++  +M + N+  + + L      +++  VP  +L P++  FSI G Y +  + +DVY+
Sbjct: 353 YAIFWAMLLVNVTFIFVGLFGAKLFARVTFVPVQILWPVVFTFSIVGAYALDQSMLDVYI 412

Query: 422 MILVAMGAIALRLANFPLAPLLLGFILGGLMEENLRRALIITDGEISFLWERPITLAFTV 481
            +   +    +R   + + PL +G ILGG++E+ L ++LI+ D +   ++ RP+TL F V
Sbjct: 413 ALASGVVGYFMRRFGYSVVPLAIGLILGGMLEKRLGQSLIMLDDQWWLMFTRPLTLFFFV 472

Query: 482 LAIVTLLSPLFGRLMERK 499
           L ++ L  P F RL +++
Sbjct: 473 LTVLALFGPFFWRLFKQR 490