Pairwise Alignments

Query, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., ABC transporter for D-galactose/L-arabinose, permease component (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  164 bits (415), Expect = 3e-45
 Identities = 106/312 (33%), Positives = 170/312 (54%), Gaps = 26/312 (8%)

Query: 23  LFILLAIIVIQEPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQGTDLSAGRQVGLAAV 82
           +F+L  +++    +FLS  N+  +    S   I A  +   + +   DLS G  +  A V
Sbjct: 33  IFVLCTLMI---DNFLSPLNMRGLGLAISTTGIAACTMLYCLASGHFDLSVGSVIACAGV 89

Query: 83  ISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGVIVAYLKVTPFIATLGT 142
           ++A +++   + N VF  LG       I +  ++G I+GL+NG+++A L+V   I TL T
Sbjct: 90  VAAVVMR---DTNSVF--LG-------ISAALVMGLIVGLINGIVIAKLRVNALITTLAT 137

Query: 143 MIIVYGINSLYYD--SVGASPIAGFDERFTTFTQGFIRIGDFRFSYITFYAIIAIIFMWV 200
           M IV G+  ++ +  +VG S      E F  F  G +    F         I+  +F   
Sbjct: 138 MQIVRGLAYIFANGKAVGVS-----QESFFVFGNGQM----FGVPVPILITIVCFLFFGW 188

Query: 201 LWNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFGGMLEAGRIGSATNN 260
           L N T +G+N  A+GGN EAA ++GVNV  T + ++A+ GV  A  G++ A R+ S    
Sbjct: 189 LLNYTTYGRNTMAIGGNQEAALLAGVNVDRTKIIIFAVHGVIGALAGVILASRMTSGQPM 248

Query: 261 LGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINYGMTYIGVSPYWQYIIKGS 320
           +G  +EL  I+ACV+GGVS +GG+G I  V+ GVLI  +I   M    +  ++QY+I+GS
Sbjct: 249 IGQGFELTVISACVLGGVSLSGGIGMIRHVIAGVLILAIIENAMNLKNIDTFYQYVIRGS 308

Query: 321 IIIFAVALDSMK 332
           I++ AV +D +K
Sbjct: 309 ILLLAVVIDRLK 320