Pairwise Alignments

Query, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., ABC transporter from Pseudomonas fluorescens FW300-N2C3

 Score =  202 bits (513), Expect = 1e-56
 Identities = 114/308 (37%), Positives = 183/308 (59%), Gaps = 15/308 (4%)

Query: 31  VIQEPSFL-SLRNLSNILTQSSVRVIIALGVAGLIVTQGTDLSAGRQVGLAAVISATLLQ 89
           ++++ SFL + + L  ++ Q S+  ++A+GV  +I+T G DLS+G  + L+A+I+A+L Q
Sbjct: 43  IMRDQSFLMNSQRLVLMILQVSIIGLLAIGVTQVIITTGIDLSSGSVLALSAMIAASLAQ 102

Query: 90  SMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGVIVAYLKVTPFIATLGTMIIVYGI 149
           + D    VFPSL ++P+   +++   +G + G +NG I+A   + PFIATLG M+   G+
Sbjct: 103 TSDFARAVFPSLTDLPVWIPVVAGLGVGLLAGAINGSIIAITGIPPFIATLGMMVSARGL 162

Query: 150 NSLYYDSVGASPIAGFDERFTTFTQGFIRIGDFRFSYITFYAIIAIIFMWVLWNKTVFGK 209
              Y +     P++   + +T    G + +          + ++A+IF   L   T +GK
Sbjct: 163 ARYYTEG---QPVSMLSDSYTAIGHGAMPV--------IIFLVVAVIFHIAL-RYTKYGK 210

Query: 210 NIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFGGMLEAGRIGSATNNLGFLYELDA 269
             +A+GGN +AA+ SG+NV   L+ VY+++G+     G++ + R  +    +G  YELDA
Sbjct: 211 YTYAIGGNMQAARTSGINVKRHLVIVYSIAGLLAGLAGVVASARAATGQAGMGMSYELDA 270

Query: 270 IAACVVGGVSFAGGVGSIAGVVTGVLIFTVINYGMTYIGVSPYWQYIIKGSIIIFAVALD 329
           IAA V+GG S AGGVG I G V G LI  V+  G T++GV  Y Q IIKG II+ AV +D
Sbjct: 271 IAAAVIGGTSLAGGVGRITGTVIGALILGVMASGFTFVGVDAYIQDIIKGLIIVVAVVID 330

Query: 330 SMKYANKK 337
             +Y NK+
Sbjct: 331 --QYRNKR 336