Pairwise Alignments

Query, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., monosaccharide ABC transporter membrane protein, CUT2 family from Pseudomonas syringae pv. syringae B728a

 Score =  204 bits (518), Expect = 3e-57
 Identities = 116/316 (36%), Positives = 184/316 (58%), Gaps = 14/316 (4%)

Query: 22  VLFILLAIIVIQEPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQGTDLSAGRQVGLAA 81
           ++F L   IV  +   L+ + L  ++ Q S+  ++A+GV  +I+T G DLS+G  + L+A
Sbjct: 36  LIFELFGWIVRDQSFLLNSQRLVLMILQVSIIGLLAIGVTQVIITTGIDLSSGSVLALSA 95

Query: 82  VISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGVIVAYLKVTPFIATLG 141
           +I+A+L Q+ D    VFPSL ++P+   ++    +G + G +NG I+A   + PFIATLG
Sbjct: 96  MIAASLAQTSDFSRAVFPSLTDLPVWIPVVVGLGVGLLAGAINGSIIAITGIPPFIATLG 155

Query: 142 TMIIVYGINSLYYDSVGASPIAGFDERFTTFTQGFIRIGDFRFSYITFYAIIAIIFMWVL 201
            M+   G+   Y +     P++   + +T   QG + +          + ++A+IF   L
Sbjct: 156 MMVSARGLARFYTEG---QPVSMLSDSYTAIGQGAMPV--------IIFLVVAVIFHIAL 204

Query: 202 WNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFGGMLEAGRIGSATNNL 261
              T +GK  +A+GGN +AA+ SG+NV   L+ VY+++G+     G++ + R  +    +
Sbjct: 205 -RYTKYGKYTYAIGGNMQAARTSGINVKRHLVIVYSIAGLLAGLAGVVASARAATGQAGM 263

Query: 262 GFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINYGMTYIGVSPYWQYIIKGSI 321
           G  YELDAIAA V+GG S +GGVG I G V G LI  V+  G T++GV  Y Q IIKG I
Sbjct: 264 GMSYELDAIAAAVIGGTSLSGGVGRITGTVIGALILGVMASGFTFVGVDAYVQDIIKGLI 323

Query: 322 IIFAVALDSMKYANKK 337
           I+ AV +D  +Y NK+
Sbjct: 324 IVVAVVID--QYRNKR 337