Pairwise Alignments

Query, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., monosaccharide ABC transporter membrane protein, CUT2 family from Pseudomonas syringae pv. syringae B728a

 Score =  195 bits (495), Expect = 2e-54
 Identities = 115/309 (37%), Positives = 177/309 (57%), Gaps = 20/309 (6%)

Query: 22  VLFILLAIIV-IQEPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQGTDLSAGRQVGLA 80
           ++FILL +++      F++ RN  +IL Q+S+  I+A+G+  +I+T+G DLS G  +  A
Sbjct: 29  LVFILLCLVLAFASEYFMTWRNWMDILRQTSINGILAVGMTYVILTKGIDLSVGSILAFA 88

Query: 81  AVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGVIVAYLKVTPFIATL 140
            + SA +                  +LA + +    GA++G+VNG +VA L + PF+ATL
Sbjct: 89  GLCSALVATQ------------GYGLLAAVSAGMFAGAMLGVVNGFMVANLSIPPFVATL 136

Query: 141 GTMIIVYGINSLYYDSVGASPIAGFDERFTTFTQGFIRIGDFRFSYITFYAIIAIIFMWV 200
           G + I  G+  +  D    SP+    E +     G  RIG      I F A++A+IF W+
Sbjct: 137 GMLSIARGMTFILNDG---SPVTDLPEEYLAL--GIGRIGPIGVPIIIF-AVVALIF-WM 189

Query: 201 LWNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFGGMLEAGRIGSATNN 260
           +   T +G+ ++AVGGN ++A+ SG+ V   +  VY +SG+     G++ + R  SA   
Sbjct: 190 VLRYTTYGRYVYAVGGNEKSARTSGIGVRKVMFSVYVVSGLLAGLAGVVLSARTTSALPQ 249

Query: 261 LGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINYGMTYIGVSPYWQYIIKGS 320
            G  YELDAIAA V+GG S +GG GSI G + G L+  VIN G+  +GVS Y+Q + KG 
Sbjct: 250 AGMSYELDAIAAVVIGGTSLSGGTGSIVGTLFGALLIGVINNGLNLLGVSSYYQQVAKGL 309

Query: 321 IIIFAVALD 329
           II+FAV +D
Sbjct: 310 IIVFAVLID 318