Pairwise Alignments

Query, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., L-arabinose ABC transporter membrane protein from Pseudomonas syringae pv. syringae B728a

 Score =  154 bits (390), Expect = 2e-42
 Identities = 101/312 (32%), Positives = 168/312 (53%), Gaps = 26/312 (8%)

Query: 23  LFILLAIIVIQEPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQGTDLSAGRQVGLAAV 82
           +F+L A+ +    +F+S  N+  +    S   I A  +   + +   DLS G  +  + V
Sbjct: 40  IFLLCAVFI---DNFMSPLNMRGLGLAISTVGIAACTMLFCLASGHFDLSVGSVLACSGV 96

Query: 83  ISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGVIVAYLKVTPFIATLGT 142
           I++ +++  D+V      LG    LA       +G ++GL+NG+++A L++   I TL T
Sbjct: 97  IASIVIRDTDSV-----FLGVSAALA-------LGLVVGLINGIVIAKLRINALITTLAT 144

Query: 143 MIIVYGINSLYYD--SVGASPIAGFDERFTTFTQGFIRIGDFRFSYITFYAIIAIIFMWV 200
           M IV G+  ++ +  +VG S     +E F  F  G +    +         I   IF   
Sbjct: 145 MQIVRGLAYIFSNGKAVGVS-----NEDFFIFGNGQV----YGVPVPILITIACFIFFGW 195

Query: 201 LWNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFGGMLEAGRIGSATNN 260
           L N T +G+N  A+GGN EAA ++GV+V  T + ++A+ G+  A  G++ A R+ S    
Sbjct: 196 LLNYTTYGRNTMAIGGNQEAALLAGVHVDRTKIIIFAVHGLVGALAGVVLASRMTSGQPM 255

Query: 261 LGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINYGMTYIGVSPYWQYIIKGS 320
           +G  +EL  I+ACV+GGVS +GG+G I  V+ GVLI  +I   M    +  ++QY+I+G+
Sbjct: 256 IGQGFELTIISACVLGGVSLSGGIGMIRHVIAGVLILAIIENAMNLKNIDTFYQYVIRGT 315

Query: 321 IIIFAVALDSMK 332
           I++ AV +D MK
Sbjct: 316 ILLLAVIIDRMK 327