Pairwise Alignments

Query, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  171 bits (433), Expect = 2e-47
 Identities = 111/327 (33%), Positives = 175/327 (53%), Gaps = 22/327 (6%)

Query: 5   AVKSFAIKHLKE-GAIYAVLFILLAIIVIQEPSFLSLRNLSNILTQSSVRVIIALGVAGL 63
           A K+  ++ LK+ G I+  L +L  +     P F+++ N  NIL Q +V  I A G+  +
Sbjct: 6   AAKAALVRALKQYGGIFLSLVMLCIVFSFFNPRFMTVVNFMNILQQVAVVAIAAFGMTWV 65

Query: 64  IVTQGTDLSAGRQVGLAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLV 123
           I+    DLS G  + +A ++ A               +G  P +A+ ++    GA++G++
Sbjct: 66  ILLGEIDLSVGSIIAVAGMVGAQCFAF---------GMGFAPAIALTLAA---GALMGML 113

Query: 124 NGVIVAYLKVTPFIATLGTMIIVYGINSLYYDSVGASPIAGFDERFTTF-TQGFIRIGDF 182
           NGV+ A L +  FI T+ TM I  G+ SL       +P    +E +T   T+ F+ +   
Sbjct: 114 NGVLTAKLLLPSFIVTVATMGIYRGMVSL---PTNGAPAMIENETWTAIGTESFLGL--- 167

Query: 183 RFSYITFYAIIAIIFMWVLWNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVF 242
               I +   +  +   ++ +KT FG+  +  GGN EAA  SG+ V    + ++ +SGV 
Sbjct: 168 --PIIIWVVAVLFVINQIVLSKTSFGRRAYLTGGNREAAVYSGIKVDRLKILIFMISGVM 225

Query: 243 YAFGGMLEAGRIGSATNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINY 302
            A  G+L + R+ SA  N G  YELDAIAA V+GG S AGGVG++ G + G LI  V+N 
Sbjct: 226 AAISGVLLSSRLFSAQTNAGMSYELDAIAAAVLGGTSLAGGVGTMVGTLIGALIIGVMNN 285

Query: 303 GMTYIGVSPYWQYIIKGSIIIFAVALD 329
           GM  + V  ++Q I+KG +I+ AV LD
Sbjct: 286 GMNMLSVPYFYQLIVKGLVILVAVWLD 312