Pairwise Alignments

Query, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., L-arabinose transporter permease from Sinorhizobium meliloti 1021

 Score =  158 bits (400), Expect = 2e-43
 Identities = 102/316 (32%), Positives = 169/316 (53%), Gaps = 26/316 (8%)

Query: 19  IYAVLFILLAIIVIQEPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQGTDLSAGRQVG 78
           I+A  F+++A+ V   P+FL+ RN+  +L       ++A  +   + ++  DLS G  V 
Sbjct: 18  IFAAAFVVVALTV---PNFLTERNMLGLLQSVVTIGVVACTMMFCLASRDFDLSVGSTVA 74

Query: 79  LAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGVIVAYLKVTPFIA 138
            + +++            V  S     I+  +++    G I+GL NG+++A  ++   I 
Sbjct: 75  FSGMVA------------VMASNATGSIVLGLLAALACGGIVGLANGIVIARFRINALIT 122

Query: 139 TLGTMIIVYGINSLYYD--SVGASPIAGFDERFTTFTQGFIRIGDFRFSYITFYAIIAII 196
           TL TM IV G   +  D  +VG +    +    + F            + I   A+  I+
Sbjct: 123 TLATMQIVRGFALIASDGRAVGINDPVFYQLSLSKFLTVP--------TPIWVMALFFIV 174

Query: 197 FMWVLWNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFGGMLEAGRIGS 256
           F ++L N+TVFGKN  A+GGNPEA++++GV+V    + ++AL G+  A  G+L A RI S
Sbjct: 175 FGFLL-NRTVFGKNTLAIGGNPEASRLAGVDVARMRIWIFALQGLVCAVAGVLLASRITS 233

Query: 257 ATNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINYGMTYIGVSPYWQYI 316
              N     EL  I+ACV+GGVS AGG  ++ GVV GVLI  +    M  + +  ++QY+
Sbjct: 234 GQPNAATGLELSVISACVLGGVSLAGGRATMTGVVVGVLIMGIAENVMNLLNIQAFYQYV 293

Query: 317 IKGSIIIFAVALDSMK 332
           ++G I++ AV LD+M+
Sbjct: 294 VRGLILLIAVLLDNMR 309