Pairwise Alignments

Query, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

 Score =  189 bits (480), Expect = 9e-53
 Identities = 121/342 (35%), Positives = 189/342 (55%), Gaps = 26/342 (7%)

Query: 1   MTMDAVKSFAIKHLKEGAIYAVLFI------LLAIIVIQ----EPSFLSLRNLSNILTQS 50
           +T  A K+  I   K G ++A L +      L  + V+Q    E +FL++ NL  IL Q 
Sbjct: 3   ITQPAAKA-PISLRKYGIVFAFLGLCVLVSALCQLKVVQGAWPENTFLTVNNLMLILHQI 61

Query: 51  SVRVIIALGVAGLIVTQGTDLSAGRQVGLAAVISATLLQSMDNVNKVFPSLGEIPILAVI 110
           SV  ++A+G+  ++++ G DLS G  +  + +++A++      V    P     P++  I
Sbjct: 62  SVNGVLAVGMTFVVISAGIDLSVGSVLAFSGMMAASMATRSVGVT---PWSDTYPVIFPI 118

Query: 111 ISVCLIGAIIGLVNGVIVAYLKVTPFIATLGTMIIVYGINSLYYDSVGASPIAGFDERFT 170
           I+   +GA+ G ++G I+A  ++  FIATLG ++   G         G +PI+G    F 
Sbjct: 119 IAALGVGALCGGLSGWIIARFRIQAFIATLGMLLAARGFTM---SVTGGNPISGLSPDFR 175

Query: 171 TFTQGFIRIGDFRFSYITF-YAIIAIIFM--WVLWNKTVFGKNIFAVGGNPEAAKVSGVN 227
            F  G +      F  I     I+A++F+  WV+ NKTVFG+ ++AVGGN ++A+ SG+N
Sbjct: 176 WFGTGKL------FEVIPVPVVILALVFLLAWVILNKTVFGRYVYAVGGNEKSARTSGIN 229

Query: 228 VPLTLLKVYALSGVFYAFGGMLEAGRIGSATNNLGFLYELDAIAACVVGGVSFAGGVGSI 287
               L+ VY ++G      G++   + GSA  + G  YELDAIAA V+GG S AGGVG +
Sbjct: 230 TGAILIWVYVVAGFLAGVAGVILTAKTGSAQTSAGSSYELDAIAAVVIGGASLAGGVGRL 289

Query: 288 AGVVTGVLIFTVINYGMTYIGVSPYWQYIIKGSIIIFAVALD 329
            G   G LI  V+N G+  +GV  ++Q IIKG +I+ AV LD
Sbjct: 290 TGTFFGALIIGVMNNGLDILGVQSFYQLIIKGGLIVVAVILD 331