Pairwise Alignments

Query, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., putative sugar transport system, permease protein from Phaeobacter inhibens DSM 17395

 Score =  162 bits (410), Expect = 1e-44
 Identities = 106/321 (33%), Positives = 166/321 (51%), Gaps = 16/321 (4%)

Query: 13  HLKEGAIYAVLFILLAII--VIQEPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQGTD 70
           H+    +  ++ +L  I+  ++    F S   L+ IL Q  +  I+A   + +I+T G D
Sbjct: 37  HVTPSLVPLIVLVLSVIVFGLLLGSKFFSPFALTLILQQVGIVGIVACAQSLVILTAGID 96

Query: 71  LSAGRQVGLAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGVIVAY 130
           LS G  + L++V+              F     +P    +    + G I G +NG +VA 
Sbjct: 97  LSVGAIMVLSSVVMGQ-----------FTFRYGLPPEVAVACGLICGTICGFINGWLVAR 145

Query: 131 LKVTPFIATLGTMIIVYGINSLYY--DSVGASPIAGFDERFTTFTQGFIRIGDFRFSYIT 188
           +K+ PFI TLG   IV   N LY   +++ +  IA        F +  I+IG   F+Y  
Sbjct: 146 MKLPPFIVTLGMWQIVLASNFLYSANETIRSQTIAAEAPLLQLFGEK-IKIGGAVFTYGV 204

Query: 189 FYAIIAIIFMWVLWNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFGGM 248
            + +I ++ +  +   T +G++++AVG +PEAA++SGV V   L+ VY LSG+  AF G 
Sbjct: 205 IFMVILVVLLAYVLRHTAWGRHVYAVGDDPEAAELSGVKVTRVLISVYMLSGLICAFAGW 264

Query: 249 LEAGRIGSATNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINYGMTYIG 308
              GRIGS +   G L  +++I A V+GG+S  GG GSI G   G LI  V   G+  +G
Sbjct: 265 AMIGRIGSVSPTSGQLANIESITAVVIGGISLFGGRGSILGTFFGALIVGVFTLGLRLLG 324

Query: 309 VSPYWQYIIKGSIIIFAVALD 329
               W Y++ G +II AVA+D
Sbjct: 325 ADAQWTYLLIGLLIIAAVAVD 345