Pairwise Alignments

Query, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., L-arabinose ABC transporter permease AraH from Klebsiella michiganensis M5al

 Score =  164 bits (415), Expect = 3e-45
 Identities = 107/319 (33%), Positives = 170/319 (53%), Gaps = 22/319 (6%)

Query: 19  IYAVLFILLAIIVIQEPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQGTDLSAGRQVG 78
           ++AVLFI   I V    SF++++ L   ++ S +   +A G+   + +   DLS    + 
Sbjct: 28  VFAVLFIGCVIFVPNFASFINMKGLGLAISMSGM---VACGMLFCLASGDFDLSVASVIA 84

Query: 79  LAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGVIVAYLKVTPFIA 138
            A V +A ++   +++   +  +G         +  L+GA+ GLVNG ++A LK+   I 
Sbjct: 85  CAGVTTAVVINLTESM---WIGIG---------AGLLLGALSGLVNGFVIARLKINALIT 132

Query: 139 TLGTMIIVYGINSLYYDSVGASPIAGFDERFTTFTQGFIRIGDFRFSYITFYAIIAIIFM 198
           TL TM IV G+  +  D      +   DERF  FT G+     F      +  +  +I  
Sbjct: 133 TLATMQIVRGLAYIISDG---KAVGIEDERF--FTLGYANW--FGLPAPIWLTVACLIVF 185

Query: 199 WVLWNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFGGMLEAGRIGSAT 258
            +L NKT FG+N  A+GGN EAA+++GV V  T + ++ LSG+  A  G++ A R+ S  
Sbjct: 186 GLLLNKTTFGRNTLAIGGNEEAARLAGVPVVRTKIIIFVLSGLVSAAAGIILASRMTSGQ 245

Query: 259 NNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINYGMTYIGVSPYWQYIIK 318
                 YEL  I+ACV+GGVS  GG+G I+ VV G+LI   +   M  + +SP+ QY+++
Sbjct: 246 PMTSIGYELIVISACVLGGVSLKGGIGKISYVVAGILILGTVENAMNLLNISPFSQYVVR 305

Query: 319 GSIIIFAVALDSMKYANKK 337
           G I++ AV  D  K   K+
Sbjct: 306 GVILLAAVIFDRYKQKAKR 324