Pairwise Alignments

Query, 324 a.a., galactose/glucose ABC transporter substrate-binding protein MglB from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., Periplasmic binding protein/LacI transcriptional regulator (NCBI) from Rhodospirillum rubrum S1H

 Score = 84.7 bits (208), Expect = 3e-21
 Identities = 79/305 (25%), Positives = 128/305 (41%), Gaps = 28/305 (9%)

Query: 1   MRKLTVLAMLSAGMGFGTQALA----DTTIGFTIYKYDDNFMSVV-RQAIEKEAAADSNT 55
           M+KL + A  +A +   + A+A       I   +Y     F+ ++ R   E  A      
Sbjct: 1   MKKLLLTACAAAALLSASAAMAADAPKARIAVLMYGNKAEFVQLMERYGKEHPAVKAGIA 60

Query: 56  RILMNDSQNSQSMQNDQVDVMLARGVQALAINLVDPAAAPTIIQKAKIDDVPVVFYNKEP 115
            +   D +   ++QNDQ  + +     A+ +N +D  A   I   AK+  +PVV  N   
Sbjct: 61  EVTFYDGRYDAAVQNDQAQMAINTKQDAIVVNPMDYEANIDIATNAKMAGIPVVVTNAR- 119

Query: 116 SAEAMASYDKAFYVGTDSKESGIIQGDLISAQWKANPAWDKNG--DGVLQYVMLKGEPGH 173
                        + TD   + ++  D++    +A     K G    V+     KG  G 
Sbjct: 120 -------------LNTDEMTAEVVSDDVLGGYLEAKDVLTKLGCKGNVVIIEGPKGGSGE 166

Query: 174 PDAEARTTYSVQTINDNGIKTQELHMDTGMWDTAMAKDKMDAWLSGPNGSKIEVVIANND 233
                    ++       +K   L   T  W  A A D M  WLS   G KI  VI  ND
Sbjct: 167 IQRGQGNEKALAECPAGAVKV--LERKTANWSRAEALDLMQNWLSKHPG-KINGVIGQND 223

Query: 234 GMAMGAIEALRGAGQKIPVF---GVDALAEALALIKSGDMAGTVLNDAQNQAKATFELAR 290
            MA+GAIEA++ A   +  F   G+D + +AL  +K+G+M  ++L DA+ Q + + ++A 
Sbjct: 224 EMALGAIEAIKAADLNVKDFAIAGIDGVTDALHAVKAGEMT-SILQDARGQIQGSIDVAL 282

Query: 291 NLANG 295
               G
Sbjct: 283 RAVKG 287