Pairwise Alignments

Query, 324 a.a., galactose/glucose ABC transporter substrate-binding protein MglB from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., L-arabinose ABC transporter, substrate-binding component AraU (from data) from Shewanella sp. ANA-3

 Score = 66.6 bits (161), Expect = 7e-16
 Identities = 68/257 (26%), Positives = 111/257 (43%), Gaps = 22/257 (8%)

Query: 24  TTIGFTIYKYDDNFMSVVRQAIEKEAAADSNTRILMNDSQNSQSMQNDQVDVMLARGVQA 83
           TT+GF+    +  + +   +A++ EA       +   D+Q  Q  Q   V   +A+GV A
Sbjct: 23  TTVGFSQVGSESGWRTSFSEAVKAEAK-QRGIDLKFADAQQKQENQIKAVRSFIAQGVDA 81

Query: 84  LAINLVDPAAAPTIIQKAKIDDVPVVFYNKEPSAEAMASYDKAFY--VGTDSKESGIIQG 141
           + I  V       ++++AK   +PVV  ++    +     D  F   + +D  E G   G
Sbjct: 82  IIIAPVVETGWKPVLKEAKRAKIPVVIVDRNIKVDD----DSLFLTRIASDFSEEGRKIG 137

Query: 142 DLISAQWKANPAWDKNGDGVLQYVMLKGEPGHPDAEARTTYSVQTINDNGIKTQELHMDT 201
                QW      DK   G      L+G  G   A  R     Q I  N    + +   T
Sbjct: 138 -----QW----LMDKT-QGNCDIAELQGTVGATAAIDRAAGFNQVIA-NYPNAKIVRSQT 186

Query: 202 GMWDTAMAKDKMDAWLSGPNGSKIEVVIANNDGMAMGAIEALRGAGQK----IPVFGVDA 257
           G +  A  K+ M+ +L   NG  +  V ++ND MA+GA++A++ AG K    I +  VD 
Sbjct: 187 GEFTRAKGKEVMEGFLKAQNGQPLCAVWSHNDEMALGAVQAIKEAGLKPGKDILIVSVDG 246

Query: 258 LAEALALIKSGDMAGTV 274
           + +    +  GD+  TV
Sbjct: 247 VPDYFKAMADGDVNATV 263