Pairwise Alignments

Query, 1023 a.a., penicillin-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1039 a.a., Transglycosylase. from Pseudomonas stutzeri RCH2

 Score = 1157 bits (2993), Expect = 0.0
 Identities = 599/1015 (59%), Positives = 743/1015 (73%), Gaps = 9/1015 (0%)

Query: 8    RRVLKKRRRAQKNKPRYWLIAVLLIGTAGGAALFHEMETSTLQSREISRYAAGLTYQVEP 67
            R+  K RR+  +   R  L+  + +   GG   + E+E+S  Q+  +SRYAA L Y V P
Sbjct: 26   RKTAKGRRKVAR---RLALLVGISLLAGGGYLGWQELESSRWQAHWLSRYAADLDYTVMP 82

Query: 68   GASDKIAFPSYGPFDQRLGYVALPNIQERLLQRGFTIRQQVRFSDELQRYAQYGLYVPYT 127
            G S +I FP  GPFD+RLGYV LP   E+L QR F + +Q RFS  L  Y   G + PY 
Sbjct: 83   GPSPRIQFPEDGPFDRRLGYVDLPRFIEQLSQRNFRVEEQARFSRALLDYTSRGFFPPYP 142

Query: 128  EKVQAGLTLFDCRTEPVYQFRYPGNHYADFNAIPDLIVQSLLFIENRDLLSDKNPLVNPA 187
            E+ +AGL + DCR  P+Y   YP  +Y  F  IP L+V SLLFIE+R LL    P  NPA
Sbjct: 143  EESKAGLAINDCRGAPLYTNSYPRQYYERFEDIPPLVVMSLLFIEDRGLLDTDRPNANPA 202

Query: 188  VDWPRFFKAALTQVGKALDLDGQSAGGSTLATQVEKYRHSEDGLTYSPQEKIRQMVSASV 247
            VDWPRF KAA++Q+ K L L GQ+AGGSTLATQVEKYRHS +G T  PQEKIRQMVSASV
Sbjct: 203  VDWPRFTKAAISQLEKRLGLGGQAAGGSTLATQVEKYRHSPEGRTGDPQEKIRQMVSASV 262

Query: 248  RAYRLGANTLEARKLVVWAYLNSVPLSAAPGYGEVHGLGDGLWVWFAADPERVNQLLDTR 307
            R YR G  TL  R+ +V  YLNSVPLSAAPG+GEVHG+ DGL +WF AD    N+LLD R
Sbjct: 263  RTYREGPQTLATRQRIVRDYLNSVPLSAAPGHGEVHGIADGLRLWFGADFREFNRLLDPR 322

Query: 308  LNQSVNLAEQGLALRQVVALMIAHRRPSYYLAVSGRPDLNALTDSHIRLFYREKMISKSL 367
               +V+   +GLALRQV++L+IA RRPSYYL  +GR ++ ALTDSHIRL     +I  +L
Sbjct: 323  SGDAVDPQARGLALRQVLSLLIAQRRPSYYLG-AGREEMAALTDSHIRLLANGGIIDANL 381

Query: 368  MDAALNATLQFRDFVRQPAVTRINTNKGLLAARTHLSRQLGVSLYDLDRMDLSASTTLNF 427
             DAALN  +  R   R  A+  ++  KG+  AR  L+  LG+ LYDLDR+DL+AST L  
Sbjct: 382  RDAALNQRIVARSPSRDSAIQTVDATKGITVARMRLAGLLGLPLYDLDRLDLTASTPLQG 441

Query: 428  ELQSEVTRYLQKLANPEYAAQVGILGFRLLAAEKTADVRYSFTLFERTDEGFKVRVQTDN 487
            +LQ++V+ YL +LA+P +A  VG+ G R+L+ EKTADVRYSFTLFER +EGF+VRVQTDN
Sbjct: 442  DLQAQVSEYLVRLADPAFAETVGLFGDRMLSPEKTADVRYSFTLFERGEEGFRVRVQTDN 501

Query: 488  TNQPFDLNEGSKLELGSTAKLRVLTTYLEIIAKLHSKYHDLSVMELRRHLVEAQDTLSVW 547
            TNQPFD+NEGSKLELGSTAKLRVLTTYLE+IA+LH +Y DL+  ELR+  + A+  LS W
Sbjct: 502  TNQPFDINEGSKLELGSTAKLRVLTTYLEVIAELHQRYSDLTPAELRK--IGAKANLSRW 559

Query: 548  SLEWLLTSPKRDLATMLEAALEREYSADPKERFFTGGGIHTFNNFRKEDDERIVTMRDAL 607
            ++++L T   R L  ML+AALER YSA P ERFFTG G+H F NFR+EDD RI T+R++L
Sbjct: 560  AIDYLATHSDRSLDRMLDAALERRYSASPAERFFTGAGMHRFGNFRREDDGRIPTVRESL 619

Query: 608  RESINLPFVRLMKDIERYTLYSEGYRAQLMKDDKDPRRMEYLRQFADKEGRAYLLRFWRK 667
            RESINLPFVRLM+D+  Y+ +     A+L+ DDKDPRR EYL +FAD+EG  +L RFW+K
Sbjct: 620  RESINLPFVRLMRDLVSYSTHETINSAELLNDDKDPRRQEYLTRFADREGSVFLQRFWKK 679

Query: 668  YKDKTTDERMATLLEGLKPSADRLAAVHRYLLPEASVSEFVRFMDDKLPPITRDKLTDKQ 727
            Y++KT ++R+ T L+G++P+  RLAAVHRYL+P+A    F RF+   LP      L DKQ
Sbjct: 680  YRNKTAEQRIETFLQGMRPTPVRLAAVHRYLMPDAERPVFDRFLKQHLPDAD---LNDKQ 736

Query: 728  LEKLYNKYGRGKYSLPDQGYIARVHPLELWLLGYLNEHHQASFSDVVAASSDKRQEVYSW 787
            L+ LY +YG G YSLPDQ YIAR HPL+LWLLGYL  + QA+ S+VVA S  +RQEVY W
Sbjct: 737  LDALYTRYGPGAYSLPDQAYIARTHPLDLWLLGYLIANPQATLSEVVADSRAERQEVYGW 796

Query: 788  LFKTRHRNARDSRVRTMLEVEAFTDIHQSWQRLGYPFDHLVPSLATALGSSGDRPAALSE 847
            LF++RH++ARDSR+R MLEVEAFTDIH+ WQRLGYPFD+LVPSLATALGSSGDRPAAL+E
Sbjct: 797  LFRSRHKSARDSRIRIMLEVEAFTDIHRRWQRLGYPFDNLVPSLATALGSSGDRPAALAE 856

Query: 848  LMGIILNDGVRVPTKRINHLHFAQDTPFETEFTPVETQGVRVLPVEVARALRGALSQVVD 907
            LMGIILNDG+R+P+ RI++L FA+ TP+ET    V   G RV+PVEVARAL+ AL+ VV+
Sbjct: 857  LMGIILNDGIRLPSVRIDNLQFAEGTPYETRMGFVAGDGKRVMPVEVARALQDALANVVE 916

Query: 908  SGTARRISGVFKLPDGTPIVLGGKTGTGDNRLQTVNRAGTVVQSLARNRTATFVFYLGDR 967
             GTARR+ G F   DG+ + +GGKTGTGDNR+Q+V   G ++ SLA NRTATFVFYLG R
Sbjct: 917  GGTARRLQGSFVQEDGSALRVGGKTGTGDNRIQSVGAGGRLISSLALNRTATFVFYLGPR 976

Query: 968  HFGTLTAYVAGSDSEKFTFTSALPVQVLKGMAPILSPYLAPNEQECRPTMNPSST 1022
            HFGTLTAYV G  +E F FTSALPVQ LKGMAPIL PYL      C+P   P+ T
Sbjct: 977  HFGTLTAYVPGRGAENFRFTSALPVQTLKGMAPILLPYLQGQSTLCQPEHLPALT 1031