Pairwise Alignments

Query, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., two component transcriptional regulator, winged helix family from Pseudomonas syringae pv. syringae B728a

 Score =  149 bits (377), Expect = 4e-41
 Identities = 89/224 (39%), Positives = 133/224 (59%), Gaps = 7/224 (3%)

Query: 9   IIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQPDLVLLDLMLPGENGLTICR 68
           I++DD  +RE+L +Y+T           G    + +     D+V+LDLMLPGE+GL++CR
Sbjct: 34  IVDDDVAIRELLCDYLTRFNINARGVTDGTQMRQALTDETFDVVVLDLMLPGEDGLSLCR 93

Query: 69  QIRAQFLGKILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLMR--REERTS 126
            +R+     ILMLTA  +  D +  LE+GADD++ KP +PR L+ARI+ ++R  R+ER  
Sbjct: 94  WLRSTSDIPILMLTARCEPTDRIIGLELGADDYMAKPFEPRELVARIQTILRRVRDER-- 151

Query: 127 ASADATHLLQFGGLLLNQ-SRRHCELDGEVINLSDSEFDLLWLLASAADQVVSREFLTKS 185
             +D    ++F    LN   R+    DG V+ LS++EF LL +      +V+SRE L  +
Sbjct: 152 --SDQRTTIRFDAWRLNSVLRQLTAADGLVVPLSNAEFRLLRVFLERPHRVLSREQLLDA 209

Query: 186 LRGIEYDGLDRTVDNKIVTLRKKLCDDSSTPKRIITVRGKGYLF 229
            RG   +  DR++D  +  LR+KL DD   P+ I TVRG+GYLF
Sbjct: 210 ARGRSIEAFDRSIDLLVSRLRQKLGDDPKNPQLIKTVRGEGYLF 253