Pairwise Alignments
Query, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056
Subject, 259 a.a., two component transcriptional regulator, winged helix family from Pseudomonas syringae pv. syringae B728a
Score = 149 bits (377), Expect = 4e-41
Identities = 89/224 (39%), Positives = 133/224 (59%), Gaps = 7/224 (3%)
Query: 9 IIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQPDLVLLDLMLPGENGLTICR 68
I++DD +RE+L +Y+T G + + D+V+LDLMLPGE+GL++CR
Sbjct: 34 IVDDDVAIRELLCDYLTRFNINARGVTDGTQMRQALTDETFDVVVLDLMLPGEDGLSLCR 93
Query: 69 QIRAQFLGKILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLMR--REERTS 126
+R+ ILMLTA + D + LE+GADD++ KP +PR L+ARI+ ++R R+ER
Sbjct: 94 WLRSTSDIPILMLTARCEPTDRIIGLELGADDYMAKPFEPRELVARIQTILRRVRDER-- 151
Query: 127 ASADATHLLQFGGLLLNQ-SRRHCELDGEVINLSDSEFDLLWLLASAADQVVSREFLTKS 185
+D ++F LN R+ DG V+ LS++EF LL + +V+SRE L +
Sbjct: 152 --SDQRTTIRFDAWRLNSVLRQLTAADGLVVPLSNAEFRLLRVFLERPHRVLSREQLLDA 209
Query: 186 LRGIEYDGLDRTVDNKIVTLRKKLCDDSSTPKRIITVRGKGYLF 229
RG + DR++D + LR+KL DD P+ I TVRG+GYLF
Sbjct: 210 ARGRSIEAFDRSIDLLVSRLRQKLGDDPKNPQLIKTVRGEGYLF 253