Pairwise Alignments

Query, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 233 a.a., response regulator receiver protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  163 bits (413), Expect = 2e-45
 Identities = 90/228 (39%), Positives = 134/228 (58%), Gaps = 5/228 (2%)

Query: 1   MSNQPSLYIIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQPDLVLLDLMLPG 60
           +SNQ  L +IEDD +L   +  ++T +GF+V  F  G+   E I  NQ DL+L D+MLPG
Sbjct: 3   VSNQ--LLLIEDDYQLARSVKRFLTKEGFEVHHFVNGDDLAELIASNQFDLILCDVMLPG 60

Query: 61  ENGLTICRQIRAQFLGKILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLMR 120
            NG  I + +R  F G  + +TA  D  D +    +GADD++ KP+ P +L+ARI+  ++
Sbjct: 61  TNGFEIAKSLRQSFNGPFIFMTALSDVEDQLQGFNLGADDYICKPVPPPLLVARIKANLQ 120

Query: 121 REERTSASADATHLLQFGGLLLNQSRRHCELDGEVINLSDSEFDLLWLLASAADQVVSRE 180
           R +        T  + +G L +++ RR   + G ++ LS  EFDLLW+L    ++ VSRE
Sbjct: 121 RHK---PQVKTTEKIHYGNLEIDKQRRTVLVGGGLLPLSRYEFDLLWILLEHREEQVSRE 177

Query: 181 FLTKSLRGIEYDGLDRTVDNKIVTLRKKLCDDSSTPKRIITVRGKGYL 228
           +L     G EY+G+DRTVD +I  LRKKL  +     RI T  G+GY+
Sbjct: 178 YLFTKTVGREYNGIDRTVDGRISRLRKKLETNKKVRCRIYTSWGQGYM 225