Pairwise Alignments

Query, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., response regulator from Rhodopseudomonas palustris CGA009

 Score =  154 bits (388), Expect = 2e-42
 Identities = 91/241 (37%), Positives = 142/241 (58%), Gaps = 10/241 (4%)

Query: 1   MSNQPSLYIIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQPDLVLLDLMLPG 60
           MS  P + +++D+   REM+ +Y+   GF VT    G++   +I    PDLV+LDL +P 
Sbjct: 1   MSQNPHIIVVDDEAPAREMVGDYLKMHGFAVTLCDGGKSLRAEIATKLPDLVVLDLNMPE 60

Query: 61  ENGLTICRQIRAQFLGKILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLMR 120
           E+GL+I R ++A+    ++MLTA+    D V  LE+GADD+V KP + R L+ARIR ++R
Sbjct: 61  EDGLSIIRDLKAKSNVPVIMLTATASPIDRVVGLELGADDYVAKPCELRELMARIRSVLR 120

Query: 121 R---------EERTSASADATHLLQFGGLLLN-QSRRHCELDGEVINLSDSEFDLLWLLA 170
           R         E  ++A AD   L++FG   L+ +++   + DG    L+ SEF LL + A
Sbjct: 121 RAAPPKPVAAEPASAAKADNAQLVRFGTKWLDLEAQALRDDDGNEHPLTASEFGLLKVFA 180

Query: 171 SAADQVVSREFLTKSLRGIEYDGLDRTVDNKIVTLRKKLCDDSSTPKRIITVRGKGYLFV 230
           +   +V+SRE L +     + +  DR VD +I+ +R+K+  D + P  I T+RG GYLF 
Sbjct: 181 ANPKRVLSRERLLELANARDAEAFDRAVDLRIMRIRRKIEPDPTKPAVIRTIRGGGYLFS 240

Query: 231 P 231
           P
Sbjct: 241 P 241