Pairwise Alignments

Query, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 237 a.a., two component transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  187 bits (475), Expect = 2e-52
 Identities = 93/226 (41%), Positives = 146/226 (64%), Gaps = 2/226 (0%)

Query: 9   IIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQPDLVLLDLMLPGENGLTICR 68
           ++EDD +L  ++ +Y+ + G  V     G+T   +++  +PD++LLD+MLPG +GLT+C 
Sbjct: 12  LVEDDIRLANLIVDYLKSHGMHVEVERRGDTVLTRLINYKPDIILLDIMLPGMDGLTLCE 71

Query: 69  QIRAQFLGKILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLMRREERTSAS 128
           ++   F G IL+++A   + D +  LE+GADD+V KP+ P +L+ARI  L+RR  +   +
Sbjct: 72  KLPDYFAGPILLMSALGSNEDQIKGLELGADDYVVKPVDPALLIARINNLLRRTAKPPQA 131

Query: 129 ADATHLLQFGGLLLNQSRRHCELDGEVINLSDSEFDLLWLLASAADQVVSREFLTKSLRG 188
              +H L FG L ++   +   L    ++L+  EF+LLWLLAS A QV+SR+++ + L  
Sbjct: 132 --ESHCLSFGKLSIDPHTQAIRLGDLEVDLTSHEFELLWLLASQAGQVLSRQYIYQYLLN 189

Query: 189 IEYDGLDRTVDNKIVTLRKKLCDDSSTPKRIITVRGKGYLFVPDTW 234
           I++DG DR +D +I  LRKKL D+  TP RI TV G+GYLF P+ W
Sbjct: 190 IDFDGKDRKIDVRISRLRKKLGDNIETPFRIKTVWGQGYLFAPEAW 235