Pairwise Alignments

Query, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., two component transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  268 bits (684), Expect = 9e-77
 Identities = 137/226 (60%), Positives = 171/226 (75%), Gaps = 2/226 (0%)

Query: 9   IIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQPDLVLLDLMLPGENGLTICR 68
           ++EDD K+ ++L+ Y+T Q  +      G  A   IL  QPDLV+LDLMLP  +G +ICR
Sbjct: 21  LVEDDEKISQLLSSYLTMQQIETVCVHDGADAVATILAEQPDLVILDLMLPNLDGFSICR 80

Query: 69  QIRAQFLGKILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLMRREERTSAS 128
           Q++  F GKIL LTAS+DD D VAALEMGADDF+ KPI+PRVLLARIRMLMRR  + SA 
Sbjct: 81  QLQPVFDGKILFLTASEDDMDQVAALEMGADDFIIKPIQPRVLLARIRMLMRRA-KVSAP 139

Query: 129 ADATHLLQFGGLLLNQSRRHCELDGEVINLSDSEFDLLWLLASAADQVVSREFLTKSLRG 188
            +  HL  FG L LNQ R+ C L GE I+L+ SEFDLLWLLA+ AD++++RE+L K +RG
Sbjct: 140 QEQHHL-SFGELELNQQRKQCLLAGEEISLTTSEFDLLWLLAAHADEILTREYLVKQIRG 198

Query: 189 IEYDGLDRTVDNKIVTLRKKLCDDSSTPKRIITVRGKGYLFVPDTW 234
           IEYDG+DRT+DNKIV LRKKL D+ + P+RIITVR +GYLFVPD W
Sbjct: 199 IEYDGIDRTIDNKIVVLRKKLGDNPALPRRIITVRARGYLFVPDRW 244