Pairwise Alignments

Query, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., response regulator with CheY-like receiver domain and winged-helix DNA-binding domain from Dechlorosoma suillum PS

 Score =  224 bits (571), Expect = 1e-63
 Identities = 115/232 (49%), Positives = 155/232 (66%), Gaps = 2/232 (0%)

Query: 5   PSLYIIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQPDLVLLDLMLPGENGL 64
           P + ++EDD +L E+ AEY++   F+V     G+TA  +I  + PD+V+LD+MLPG++G 
Sbjct: 4   PRILLVEDDERLAELTAEYLSKNDFEVAIEPRGDTACTRIPADNPDVVVLDVMLPGKDGF 63

Query: 65  TICRQIRAQFLGKILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLMRR--E 122
            +CR +R  + G ILMLTA D+D D +  LE+GADDF++KP++PRVLLAR+R L+RR   
Sbjct: 64  EVCRTVRPHYQGVILMLTARDEDMDQILGLELGADDFISKPVQPRVLLARVRALLRRAGP 123

Query: 123 ERTSASADATHLLQFGGLLLNQSRRHCELDGEVINLSDSEFDLLWLLASAADQVVSREFL 182
              S    A   L FG   +NQ+ R  EL    I+L+ +EFDLLWLLA  A  V+SR+ L
Sbjct: 124 SEGSEGGGAGDELVFGRFRINQATRSAELGDAAIDLTTAEFDLLWLLACHAGTVLSRDDL 183

Query: 183 TKSLRGIEYDGLDRTVDNKIVTLRKKLCDDSSTPKRIITVRGKGYLFVPDTW 234
            + LRGI +DGLDR++D +I  LRKKL DD   P RI TVRGKGYLF    W
Sbjct: 184 LQRLRGIGFDGLDRSIDARISRLRKKLGDDPDNPARIKTVRGKGYLFSRHDW 235