Pairwise Alignments

Query, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., osmolarity response regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  157 bits (397), Expect = 2e-43
 Identities = 89/229 (38%), Positives = 136/229 (59%), Gaps = 3/229 (1%)

Query: 7   LYIIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQPDLVLLDLMLPGENGLTI 66
           + +++DD +LR +L  Y+  QG+QV + A  E     +      L++LDLMLPGE+GL+I
Sbjct: 8   ILVVDDDMRLRALLERYLMEQGYQVRSAANAEQMDRLLERENFHLIVLDLMLPGEDGLSI 67

Query: 67  CRQIRAQ-FLGKILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLMRR--EE 123
           CR++R Q     I+MLTA  D+ D +  LE+GADD++ KP  PR LLARI+ +MRR  ++
Sbjct: 68  CRRLRQQGSTIPIVMLTAKGDEVDRIIGLELGADDYLPKPFNPRELLARIKAVMRRQIQD 127

Query: 124 RTSASADATHLLQFGGLLLNQSRRHCELDGEVINLSDSEFDLLWLLASAADQVVSREFLT 183
              A A     + FG   L+ + R      E I L+  EF +L +L +   + +SR+ L 
Sbjct: 128 VPGAPAQQEAEISFGEFSLDLATREMYHGNEAIALTSGEFAVLKVLVTHPREPLSRDKLM 187

Query: 184 KSLRGIEYDGLDRTVDNKIVTLRKKLCDDSSTPKRIITVRGKGYLFVPD 232
              RG +Y  L+R++D ++  LR+ +  D + P+ I TV G GY+FVPD
Sbjct: 188 NLARGRDYSALERSIDVQVSRLRRLIEKDPANPRYIQTVWGLGYVFVPD 236