Pairwise Alignments

Query, 440 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  117 bits (292), Expect = 1e-30
 Identities = 78/287 (27%), Positives = 139/287 (48%), Gaps = 14/287 (4%)

Query: 152 LYCMFLIWFLSRRL----RELERVTHDFANGNLQARASTKSSKSVGKLNHSFNMMADKIS 207
           L  + + W+++R L    + +   TH  A G   +R +  S+  VG+L   FN +A  + 
Sbjct: 175 LLAVLIAWWIARTLLDPVKRVAAATHRLAAGEYASRVAVSSNDEVGQLARDFNQLAYTLE 234

Query: 208 HLILSNKALTNAIAHDLRTPIFRIQWQAEVLAESQLNAKQQQQVASIIEDTEEMETMVDE 267
                 +     ++H+LRTP+  ++ + E + E  +    Q  + S+  +   +  +VD+
Sbjct: 235 RNEKMRREFMADVSHELRTPLSVLRGELEAI-EDGVRTLDQASMKSLQGEVGMLSKLVDD 293

Query: 268 LLYYA-----KLEHPESDIQSQYLEVNQWLADFIDEQSHKSSLQIQYLPSLQPLMLDADP 322
           L   +      L + + D     L  N  + D  +E+     L +Q   +   L + ADP
Sbjct: 294 LYELSLADVGALTYRKVDCDLAELLTN--ITDMFEERCAARQLHLQLELAGGALPVHADP 351

Query: 323 QLLTRALVNLIRNAEKY--AGDRLLIEASTVDAKLCIAIHDNGPGIEEQHWPHIFDAFYS 380
             L + + NL+ N+ +Y  AG  + + A+    ++ + + D+GPG++ Q  P +F+ FY 
Sbjct: 352 GRLQQLIGNLLENSVRYTDAGGTVHVRAALQGDEVRVDVMDSGPGVDPQQLPRLFERFYR 411

Query: 381 TDSSRNKAQSGFGLGLAIVKQIMARHQGEVTLTKSPLGGACFSLWLP 427
            ++SRN+A  G GLGLAI   I   H G ++   SP GG   +L LP
Sbjct: 412 GETSRNRASGGAGLGLAICHSIALAHGGTLSADHSPTGGLWLTLCLP 458