Pairwise Alignments

Query, 440 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  111 bits (277), Expect = 4e-29
 Identities = 83/272 (30%), Positives = 139/272 (51%), Gaps = 23/272 (8%)

Query: 161 LSRRLREL----ERVTHDFANGNLQARASTKSSKSVGKLNHSFNMMADKISHLILSNKAL 216
           LSR +R L    ER++ D  +  L+     ++ ++      +FN+M  KI   +     +
Sbjct: 89  LSRPVRSLSEAAERLSEDLDSPPLEISGPQEARQAA----QTFNLMQRKIREQMQQRGRM 144

Query: 217 TNAIAHDLRTPIFRIQWQAEVLAESQLNAKQQQQVASIIEDTEEMETMVDELLYYAKLEH 276
             A++HDLRTP+ R++ + E + E +L+ +  Q       D  +M +M+D  L Y   EH
Sbjct: 145 LAAVSHDLRTPLSRLKLRVEQIEEPRLHGQMTQ-------DLNDMISMLDATLAYLN-EH 196

Query: 277 PESDIQSQYLEVNQWLADFIDEQSHKSSLQIQYLPSLQPLMLDADPQLLTRALVNLIRNA 336
             S+   Q+    Q L +   E +  +   +QY    +PL     P  L   L NL+ NA
Sbjct: 197 RRSEGLQQF--DLQALIESQAENAQDNGDDVQYEGQCKPLK--TQPMALRSCLQNLVDNA 252

Query: 337 EKYAGD-RLLIEASTVDAKLCIAIHDNGPGIEEQHWPHIFDAFYSTDSSRNKAQSGFGLG 395
            +YAG  R++IE S    +  I++ D+GPGI  +    +F+ F+  +SSRN+   G G+G
Sbjct: 253 LRYAGSARIVIEDSADHVR--ISVVDHGPGIAPEFHETVFEPFFRLESSRNRNSGGIGMG 310

Query: 396 LAIVKQIMARHQGEVTLTKSPLGGACFSLWLP 427
           ++I ++   R  GE++L ++P GG    L LP
Sbjct: 311 MSIAREAARRIGGELSLAQTPGGGLTAILVLP 342