Pairwise Alignments

Query, 440 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  109 bits (273), Expect = 2e-28
 Identities = 91/326 (27%), Positives = 144/326 (44%), Gaps = 30/326 (9%)

Query: 112 LQLDSNEQIYL--LKPDSHSPVYQAIDRADNLLFVFMLGGFAL-YCMFLIWFLSRRLREL 168
           +++   E  Y+  L P+ ++ + +       + F+ +   F L +   L+ + SR L+ L
Sbjct: 174 IEMAPGEWFYIASLLPEPYTSLEEQELPLQQVSFIVLTSAFLLLFIGLLVHWQSRPLKRL 233

Query: 169 ERVTHDFANGNLQARASTKSSKSVGKLNHSFNMMADKISHLILSNKALTNAIAHDLRTPI 228
            R   D + G             V +++ +FN M  +IS  +     L +AI+HDLRTPI
Sbjct: 234 ARAARDMSLGADVEPVVEGGGSEVIEVSRAFNAMRTRISRYLTERGQLFSAISHDLRTPI 293

Query: 229 FRIQWQAEVLAESQLNAKQQQQVASIIEDTEEMETMVDELLYYAKLEHPESDIQSQYLE- 287
            R++ + E+L + QL  K          D +E+E +V   L   K      +I+   L  
Sbjct: 294 TRLRLRVELLEDEQLQRK-------FSRDLDELELLVKGALQCVKDTDIHENIEPVDLNA 346

Query: 288 -----VNQW-LADFIDEQSHKSSLQIQYLPSLQPLMLDADPQLLTRALVNLIRNAEKYAG 341
                V  W LAD     + +   Q  Y            P  L R + NLI NA KY G
Sbjct: 347 LLECLVEPWLLADGNGRVTQQGEAQAAY---------SGKPLALKRCIGNLIDNALKY-G 396

Query: 342 DRLLIEASTVDAKLCIAIHDNGPGIEEQHWPHIFDAFYSTDSSRNKAQSGFGLGLAIVKQ 401
           DR  ++         + + D GPG+ EQ   H+F+  +    ++   Q G+GLGL I + 
Sbjct: 397 DRAHLKVEDDARAFVLHVDDEGPGVPEQRLEHVFEPHFRLAGNQ---QQGYGLGLGIARN 453

Query: 402 IMARHQGEVTLTKSPLGGACFSLWLP 427
           I   H GEV+L     GG   +L+LP
Sbjct: 454 IAHSHGGEVSLQNLRDGGLRVTLYLP 479