Pairwise Alignments

Query, 440 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., HAMP domain-containing sensor histidine kinase from Synechocystis sp000284455 PCC 6803

 Score =  114 bits (286), Expect = 4e-30
 Identities = 86/284 (30%), Positives = 138/284 (48%), Gaps = 29/284 (10%)

Query: 165 LRELERVTHDFANGNLQARASTKSSKSVGKLNHSFNMMADKISHLILSNKALTNAIAHDL 224
           L  L+  T + A G+LQ+R        + +L  SFN MAD + ++    + L + + H+L
Sbjct: 97  LDRLKLATKNLAEGDLQSRMPPSDIPELEELGQSFNRMADSLENVEQQRRELVSDLTHEL 156

Query: 225 RTPIFRIQWQAEVLAESQLNAKQQQQVASIIEDTEEMETMVDELLYYAKLEHPESDIQSQ 284
           R+P+  ++   E LAE  + A   +    ++ +T  +E +  +L   +K+E     IQ Q
Sbjct: 157 RSPLTVVRGYLEQLAEGTI-AGDPELYQRLVGETRRLERLTVDLQELSKVEAGYLSIQRQ 215

Query: 285 YLEV-------NQWLADFIDEQSHKSSLQIQYLPSLQPLMLDADPQLLTRALVNLIRNAE 337
            L++        Q  AD + E   +  L +Q  P L  ++  ADP    + LVNLI NA 
Sbjct: 216 PLDLYPLLAKLQQRFADQLLEDGPELILAVQ--PPLPTVL--ADPDRAEQILVNLIGNAV 271

Query: 338 KYAGDRLLIEASTVDAKLC-------------IAIHDNGPGIEEQHWPHIFDAFYSTDSS 384
           +Y        A T+DA LC             + + D G GI E   P++F+ F+  D S
Sbjct: 272 RYTPSG----AITIDAYLCTNRKDMEKENLLWVTVTDTGIGIAEGDLPYVFERFWRADKS 327

Query: 385 RNKAQSGFGLGLAIVKQIMARHQGEVTLTKSPLGGACFSLWLPL 428
           R++   G GLGLAI K+++    G +T+T +   G+ F   LPL
Sbjct: 328 RSRYSGGTGLGLAIAKRLVELQGGSLTVTSTLGQGSEFRFSLPL 371