Pairwise Alignments

Query, 440 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., sensor protein CpxA (RefSeq) from Shewanella amazonensis SB2B

 Score =  138 bits (347), Expect = 4e-37
 Identities = 85/281 (30%), Positives = 148/281 (52%), Gaps = 9/281 (3%)

Query: 152 LYCMFLIWFLSRRLRELERVTHDFANGNLQAR---ASTKSSKSVGKLNHSFNMMADKISH 208
           L C  L W L R L+ L++     A GNL +R   A+      +G+L H+FN MA+ I  
Sbjct: 176 LLCGLLAWHLGRPLKMLKQSADALARGNLGSRVDEATLNRRDELGQLGHAFNAMAEAIEQ 235

Query: 209 LILSNKALTNAIAHDLRTPIFRIQWQAEVLAESQLNAKQQQQVASIIEDTEEMETMVDEL 268
            + + + L   I+H+LRTP+ R+Q     LA ++   +   ++  I  + E+++ ++ EL
Sbjct: 236 QVNNQQRLMGDISHELRTPLTRLQL---ALALARKRGQDSNELNRIAHEAEQLDALIAEL 292

Query: 269 LYYAKLEHPESDIQSQYLEVNQWLADFIDEQSHKSSLQIQYLPSLQP--LMLDADPQLLT 326
           L  +++    ++ +   +E+ + L   +D+   ++S   ++L       L+L   P+LL 
Sbjct: 293 LTLSRVTMGATEAKVD-IELAETLGQVLDDAEFEASECGKHLAIEMDDNLLLSHTPKLLA 351

Query: 327 RALVNLIRNAEKYAGDRLLIEASTVDAKLCIAIHDNGPGIEEQHWPHIFDAFYSTDSSRN 386
           RA+ NL+RNA +YA  ++ +  +    ++ I I D+GPG+ +     IF  FY TD SR 
Sbjct: 352 RAVENLLRNAIRYARLQVSLTVTDTQDRIEIQICDDGPGVADAELEAIFRPFYRTDKSRE 411

Query: 387 KAQSGFGLGLAIVKQIMARHQGEVTLTKSPLGGACFSLWLP 427
           +   G+GLGLAI    +    G ++    P GG C ++ LP
Sbjct: 412 RESGGWGLGLAITAAAIEAQGGSISAQNRPTGGLCVTICLP 452