Pairwise Alignments

Query, 440 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 436 a.a., osmolarity sensor protein (RefSeq) from Shewanella loihica PV-4

 Score =  127 bits (320), Expect = 5e-34
 Identities = 76/274 (27%), Positives = 137/274 (50%), Gaps = 16/274 (5%)

Query: 159 WFLSRR----LRELERVTHDFANGNLQARASTKSSKSVGKLNHSFNMMADKISHLILSNK 214
           W+ +R+    L+ L++     + G+  A      S  + ++ ++FN M+  +  L     
Sbjct: 174 WWFARKQNKPLKRLQKAAISVSRGDYPAPLPPSGSTEIIEVTNAFNQMSRSMQQLEQDRA 233

Query: 215 ALTNAIAHDLRTPIFRIQWQAEVLAESQLNAKQQQQVASIIEDTEEMETMVDELLYYAKL 274
            L   I+HDLRTP+ RI+  +E++ E     K+      I+ D E+M+ ++++ + Y + 
Sbjct: 234 LLMAGISHDLRTPLTRIRLASEMMVEEDEYLKE-----GIVHDIEDMDAIINQFIAYIR- 287

Query: 275 EHPESDIQSQYLEVNQWLADFIDEQSHKSSLQIQYLPSLQPLMLDADPQLLTRALVNLIR 334
              + +   + +++N  L D    ++++    +  L     + + A    + R + NL+ 
Sbjct: 288 --QDQEANRELVQINDLLQDIAQAETNRDGEIVLALNECPEIPMQA--VAVKRIISNLVE 343

Query: 335 NAEKYAGDRLLIEASTVDAKLCIAIHDNGPGIEEQHWPHIFDAFYSTDSSRNKAQSGFGL 394
           NA +Y    + + +S    ++   + DNGPGI     P +F  F   DS+R     G GL
Sbjct: 344 NAFRYGNGWVQLSSSFDGRRVGFGVEDNGPGIPSDQIPKLFQPFTQGDSARGSV--GSGL 401

Query: 395 GLAIVKQIMARHQGEVTLTKSPLGGACFSLWLPL 428
           GLAI+K+I+ RHQG+V LT  P GG    +WLPL
Sbjct: 402 GLAIIKRIVDRHQGQVVLTNRPEGGLHAQVWLPL 435