Pairwise Alignments

Query, 440 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  139 bits (350), Expect = 2e-37
 Identities = 101/296 (34%), Positives = 158/296 (53%), Gaps = 18/296 (6%)

Query: 141 LLFVFMLGGFALYCMFLIWFLSRRLRELERVTHDFANGNL--QARASTKSSKS-VGKLNH 197
           L    +L G  L C  L W L + LR L++     A+G+L  +A AST + K  +G+L  
Sbjct: 168 LTLAILLSG--LLCGLLAWHLGKPLRALKQSAEAVASGDLGHRADASTTARKDEIGQLAQ 225

Query: 198 SFNMMADKISHLILSNKALTNAIAHDLRTPIFRIQWQAEVLAESQLNAKQQQQVASIIED 257
           SFN MAD I  ++ S + L + I+H+LRTP+ R+Q     LA ++   +   ++  I  +
Sbjct: 226 SFNAMADAIESMVNSQQRLISDISHELRTPLTRLQL---ALALTRKKGQASTEIDRIGYE 282

Query: 258 TEEMETMVDELLYYAKLE---HPESDIQSQYLEVNQWL--ADFIDEQSHKSSLQIQYLPS 312
            E++E M+ ELL  ++++   H      S    + Q L  A+F  EQ  KS +    +  
Sbjct: 283 AEQLEAMIAELLELSRVKLDIHEHKHRLSLAETLGQVLDDAEFEAEQQQKSLV----IDI 338

Query: 313 LQPLMLDADPQLLTRALVNLIRNAEKYAGDRLLIEASTVDAKLCIAIHDNGPGIE-EQHW 371
              LML  +P+ L RA+ NL+RNA +YA   + I A+    ++ + I D+GPGIE E   
Sbjct: 339 DDSLMLMLNPRPLARAIENLLRNAIRYAEQEISISATAEPEQVILTIKDDGPGIEDEADL 398

Query: 372 PHIFDAFYSTDSSRNKAQSGFGLGLAIVKQIMARHQGEVTLTKSPLGGACFSLWLP 427
             IF+ FY   S+R +   G+GLGLAI K  +  HQG++  + +   G   ++ LP
Sbjct: 399 QAIFEPFYRPQSARERESGGWGLGLAIAKAAIQAHQGQIVASNAAPHGLEITIRLP 454