Pairwise Alignments

Query, 440 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 760 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  119 bits (299), Expect = 3e-31
 Identities = 71/238 (29%), Positives = 124/238 (52%), Gaps = 11/238 (4%)

Query: 194 KLNHSFNMMADKISHLILSNKALTNAIAHDLRTPIFRIQWQAEVLAESQLNAKQQQQVAS 253
           K+N S N         I S + L  A+AH+ R+P+ R+Q   ++L E     K  + + +
Sbjct: 514 KINASLNQN-------IQSQRELIQAVAHEFRSPLARVQLAFDMLEEQFEQDKPTRLIDT 566

Query: 254 IIEDTEEMETMVDELLYYAKLEHPESDIQSQYLEVNQWLADFIDEQS---HKSSLQIQYL 310
           I +   E+E ++ E L + ++E     +    + +N+ L + +D  S      + +++  
Sbjct: 567 INKGLSELEKLIKEALDFIQIESKSRPLHLSQVNLNKLLGELMDANSVLYPDKTFKLEVN 626

Query: 311 PSLQPLMLDADPQLLTRALVNLIRNAEKYAGDRLLIEASTVDAKLCIAIHDNGPGIEEQH 370
           PS +  ++ AD   + RA  N++RNA ++A  ++LI      +++ + I D+GPGI  + 
Sbjct: 627 PS-EACLVKADSTQIARAFSNILRNAARFARSQVLISLKQEKSRILVIIEDDGPGIPTEQ 685

Query: 371 WPHIFDAFYSTDSSRNKAQSGFGLGLAIVKQIMARHQGEVTLTKSPLGGACFSLWLPL 428
              +F+ F   D SR +   G GLGLA+ K+I   H G +T++ S LGGA  SL  PL
Sbjct: 686 RERVFEPFVRLDQSRCRDSGGIGLGLALAKKICEAHGGALTISASQLGGAKLSLACPL 743