Pairwise Alignments

Query, 440 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  156 bits (395), Expect = 1e-42
 Identities = 127/441 (28%), Positives = 210/441 (47%), Gaps = 24/441 (5%)

Query: 1   MRRIYIESLVSLIVLFFGSLVSYSFIVYELDTDYDYVLED--YQAEALQTLLSQIRQLDS 58
           M+R++I   + L + F G       I + LD+ +   ++D   Q   L  L   I  L  
Sbjct: 1   MKRLFISLYLLLSLSFLG-------IGWTLDSIWQNNVDDSGVQDAPLIALAQLIGNL-- 51

Query: 59  PESAKTA-LRGYAEHIHKTVDLLPLTELPPEVQQHFSSEAAHSPIFHDDDRNLWLQLDSN 117
           PES + A L   +      + LLP  ++   +    + ++       +     ++Q+D +
Sbjct: 52  PESQREAFLAELSTQQSYPLRLLPKAQVAVNLDDSLARDSVLVTAPDEQHELHFIQVD-D 110

Query: 118 EQIYLLKPDSHSPVYQAIDRADNLLFVFMLGGFALYCMFLIWFLSRRLRELERVTHDFAN 177
           +QI +  P    P  Q       L  +F     AL  +  +W LSR L+ L   T  F  
Sbjct: 111 QQILMAGPIEIDPREQL----RGLFTLFFYLSLALVALIWVWPLSRDLKTLRLATKAFGQ 166

Query: 178 GNLQARASTKSSKSVGKLNHSFNMMADKISHLILSNKALTNAIAHDLRTPIFRIQWQAEV 237
                +    S   V  L  +FN MA  IS LI + K L+NA++H++RTP+ R+++   +
Sbjct: 167 AKWDTQIQLSSRSQVQPLASTFNEMARHISALIENQKHLSNAVSHEIRTPLARLKFALAL 226

Query: 238 L----AESQLNAKQQQQVASIIEDTEEMETMVDELLYYAKLEHPESDIQSQYLEVNQWLA 293
           +    A     A++Q  +  + +D +EMET++ ELL YA LE  + D++ +  E+ +   
Sbjct: 227 VPQYCAPDSDPAQRQAFLDEMQQDVKEMETLLQELLTYASLESQQQDLEFECCELTRLTQ 286

Query: 294 DFIDEQSHKSSLQIQYLPSLQPLMLDADPQLLTRALVNLIRNAEKYAGDRLLIEASTVDA 353
             I    ++ S+ I +      L +  DP L+ RAL NLI NA+++A   + I     + 
Sbjct: 287 QTISRLQNRHSIPIYFDEQTPELKVMGDPSLIERALQNLIINAQRFAQSHITIAIRQDNK 346

Query: 354 KLCIAIHDNGPGIEEQHWPHIFDAFYSTDSSRNKAQSGFGLGLAIVKQIMARHQGEVTLT 413
            + + + D+GPGI       IF+ FY +   +N    G GLGLAI+K+IM +H G V+L 
Sbjct: 347 SVQLEVMDDGPGIAAVDQEKIFEPFYRSKVVQN-GNKGHGLGLAIIKRIMHKHNGRVSLA 405

Query: 414 KSPLGGACFSL-WLPLYPNKL 433
             P G   F+L W  +  N+L
Sbjct: 406 SEP-GNTVFTLSWPRVSANRL 425