Pairwise Alignments

Query, 440 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  239 bits (609), Expect = 2e-67
 Identities = 151/431 (35%), Positives = 241/431 (55%), Gaps = 8/431 (1%)

Query: 1   MRRIYIESLVSLIVLFFGSLVSYS-FIVYELDTDYDYVLEDYQAEALQTLLSQIRQLDSP 59
           M R++I    + + +FF ++++   F ++  D+  D      +  A + L+ +I +    
Sbjct: 1   MTRLFILIYSTALAIFFIAVIAMDQFELFSTDS-LDATSLANEITATRNLVDKIGEAQGA 59

Query: 60  ESAKTALRGYAEHIHKTVDLLPLTE--LPPEVQQHFSSEAAHSPIFHDDDRNLWLQLDSN 117
           ++A+ AL+G+A+ IH  +    + +  L   ++Q       +  I   D+   +  L SN
Sbjct: 60  QAAELALQGFAKDIHLALTRYDIKDDTLSEAIKQGVKDYGLY--IEDVDENQAYFSLKSN 117

Query: 118 -EQIYLLKPDSHSPVYQAIDRADNLLFVFMLGGFALYCMFLIWFLSRRLRELERVTHDFA 176
            E ++ +  D  SP    ++R +  +FV +    AL  + +++ +SRRL  LE+    FA
Sbjct: 118 PEVVFGIINDPDSPFINTLNRKEWFVFVELCAALALISIMVLFVISRRLARLEKTCIAFA 177

Query: 177 NGNLQARASTKSSKSVGKLNHSFNMMADKISHLILSNKALTNAIAHDLRTPIFRIQWQAE 236
            G+  ARAST S  SVG+LN SFN+MAD+IS LI S+K LTNAIAH+ RTPIFRIQ   +
Sbjct: 178 YGDFSARASTSSLHSVGQLNLSFNIMADRISQLIQSHKNLTNAIAHESRTPIFRIQCNLD 237

Query: 237 VLAESQLNAKQQQQVASIIEDTEEMETMVDELLYYAKLEHPESDIQSQYLEVNQWLADFI 296
           +L +S +  +Q Q +  I ED  E+  M++ELL++AKLE P++ +      +   LA  +
Sbjct: 238 MLDDSGVRPEQMQYLEGIQEDLNELGGMIEELLHFAKLERPDAQLSLTPTRLYPLLASQL 297

Query: 297 DEQSHKSSLQIQYLPSLQPLMLDADPQLLTRALVNLIRNAEKYAGDRLLIEASTVDAKLC 356
           +    ++  ++Q L     L+      LL RA  N+IRN  KYA   + +  S+ +  + 
Sbjct: 298 EHLQFETPKRLQ-LSGDDSLIAPIANHLLLRATSNIIRNGYKYAQSCVNVTLSSDETSVL 356

Query: 357 IAIHDNGPGIEEQHWPHIFDAFYSTDSSRNKAQSGFGLGLAIVKQIMARHQGEVTLTKSP 416
           I I ++GP I   +W  IF+ F   D +R++   G GLGLAI KQI+ +HQGE+TL  S 
Sbjct: 357 IEIANDGPPIPRDYWQSIFEPFVRLDKARDRQSGGHGLGLAIAKQIVRQHQGELTLGDSE 416

Query: 417 LGGACFSLWLP 427
           LGG CF+L LP
Sbjct: 417 LGGPCFTLRLP 427