Pairwise Alignments

Query, 440 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., sensor protein RstB, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  148 bits (374), Expect = 3e-40
 Identities = 98/305 (32%), Positives = 159/305 (52%), Gaps = 13/305 (4%)

Query: 118 EQIYLLKPDSHSPVYQAIDRAD--NLLFVFMLGGFALYCMFLIWFLSRRLRELERVTHDF 175
           EQ+ +  P    P      RAD  NL  +F     A   +  +  LSR L  L + T DF
Sbjct: 128 EQVLMAGPIEIDP------RADLRNLFTLFFYLSLAFVALIWVGPLSRDLSILRKATKDF 181

Query: 176 ANGNLQARASTKSSKSVGKLNHSFNMMADKISHLILSNKALTNAIAHDLRTPIFRIQWQA 235
                  R +  +   V  L ++FN MA  IS LI + K L+NA++H++RTP+ R+++  
Sbjct: 182 GEAKWDTRINLSNRSQVKPLANTFNEMARHISALIENQKHLSNAVSHEIRTPLARLKFAL 241

Query: 236 EVL---AESQLNAKQQQQVASIIE-DTEEMETMVDELLYYAKLEHPESDIQSQYLEVNQW 291
            ++    +   + + +Q   + ++ D +EME ++ ELL YA LE     I     ++   
Sbjct: 242 ALMPMYCKPDSDEQTRQDFLNEMQLDIKEMENLLQELLTYASLESQREGIPLDEYDLITL 301

Query: 292 LADFIDEQSHKSSLQIQYLPSLQPLMLDADPQLLTRALVNLIRNAEKYAGDRLLIEASTV 351
           +   I   S  S   I     +  L L  +P L+ RAL NL+ NA+++A  ++LIE S  
Sbjct: 302 INQCIKRLSTLSETPITLHADMDALPLVGEPALIERALQNLLTNAQRFARHQILIEVSQT 361

Query: 352 DAKLCIAIHDNGPGIEEQHWPHIFDAFYSTDSSRNKAQSGFGLGLAIVKQIMARHQGEVT 411
             ++ +++ ++G  I E   P +F+ FY + S +N    G GLGLAI+K+IM RHQGEV+
Sbjct: 362 PQRVTLSVSNDGEPIPEVDLPKVFEPFYRSQSVQN-GNKGHGLGLAIIKRIMQRHQGEVS 420

Query: 412 LTKSP 416
           ++ +P
Sbjct: 421 VSSNP 425