Pairwise Alignments

Query, 257 a.a., outer membrane protein OmpV from Vibrio cholerae E7946 ATCC 55056

Subject, 249 a.a., MipA/OmpV family protein from Pantoea sp. MT58

 Score = 80.1 bits (196), Expect = 4e-20
 Identities = 62/210 (29%), Positives = 92/210 (43%), Gaps = 8/210 (3%)

Query: 52  QDKSYGALLNFGYHGEDF-NADLSGLNYRFFGNTGDIVNLGTYLTGSGVAY--DQDSANS 108
           QD+ Y  L    Y GEDF    L G  Y +         L   L GS   Y   ++    
Sbjct: 44  QDR-YLPLPVINYEGEDFWFRSLQGGYYLWKDPQNQ---LSLTLLGSPQEYKPSENDLGD 99

Query: 109 VKGMDKRKATVDLGLNADIALGDGTVSTYFQHDILNENKGYKTGVNYFHIIDLGVADLVP 168
           +KG+DKR+ T+  G         G V T    D+LN + G    + Y +  ++G   L P
Sbjct: 100 MKGLDKRRMTLMGGATYRHVADWGIVRTSLLGDVLNNSNGMMWDLTYLYRFEMGDFSLTP 159

Query: 169 FAGISYQSSDYNNYYFGVKDKE-ATAQRKAYHAGGDFSYNLGYKLVYPINDRWEITQTSA 227
             G  + S++ N YY+GV   E A      Y     +S  +     Y I+ +W  + T  
Sbjct: 160 GIGAIWNSANQNRYYYGVSGHESARTGISRYTPDDSWSPYVELNASYQISPQWNASLTGR 219

Query: 228 YTRLGSDIAHSPIVDSANQWLVGATVAYHF 257
           YTR  S+I  SP++D + Q L+   ++Y F
Sbjct: 220 YTRFDSEIKDSPMIDKSGQALIWTGISYTF 249