Pairwise Alignments

Query, 257 a.a., outer membrane protein OmpV from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., outer membrane protein from Caulobacter crescentus NA1000

 Score = 55.5 bits (132), Expect = 1e-12
 Identities = 56/193 (29%), Positives = 83/193 (43%), Gaps = 18/193 (9%)

Query: 79  RFFGNTGDIVNLGTYLTGSGVAYDQDSANSVKGMDKRKATVDLG---------LNADIAL 129
           RFF +  + V   T L GS V      A  V G  +R A V +G         + AD+ L
Sbjct: 66  RFFASGREGVGY-TVLDGSAVKVSA-GATFVPGYRRRDAPVGVGRLDGGAGLRVAADMRL 123

Query: 130 GDGTVSTYFQHDILNENKGYKTGVNYFHIIDLGVA-DLVPFAGISYQSSDYNNYYFGVKD 188
           G+  VS      +  +  G     +  + + L     L+P    ++  S YN  YFG+  
Sbjct: 124 GEVLVSMSATKVVSGDVDGALVDASLAYPVRLSERLSLMPSVSATWADSQYNRAYFGISA 183

Query: 189 KEATAQR-KAYHAGG---DFSYNLGYKLVYPINDRWEITQTSAYTRLGSDIAHSPIVDSA 244
            ++ A +   Y  GG   D S +L     Y +ND+  +  T++ +RL  D   SPIV  A
Sbjct: 184 AQSAASKLPVYRPGGGVKDVSMSLSAN--YRLNDKVSLGATASLSRLTGDARKSPIVVEA 241

Query: 245 NQWLVGATVAYHF 257
            Q     +VAY F
Sbjct: 242 TQPSAVLSVAYRF 254