Pairwise Alignments

Query, 158 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake from Pseudomonas fluorescens FW300-N2E2

 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 20/128 (15%)

Query: 4   LNIICVDDQREVLSAVLQDLEPLSRWINIEDCE-----SADEALELMDDLDAQGEWVAVV 58
           L+++ V+D   VL    Q L        +ED       SA+EALE +DD      +  +V
Sbjct: 5   LSVLIVEDDPHVLLGCKQAL-------TLEDIPCIGVGSAEEALERVDD-----NFAGIV 52

Query: 59  ISDHVMPGKSGVELLSEISADPRFIHTKKVLLTGQATHTDTINAINTAGIHHYFDKPWSA 118
           ISD  +PG  G+ELL+ + A  R +    VL+TG    +  + A+   G + + +KP+S 
Sbjct: 53  ISDIRLPGIDGLELLTRLKARDRSLPV--VLITGHGDISMAVGAMQ-KGAYDFMEKPFSP 109

Query: 119 KILVDCVR 126
           + LVD  R
Sbjct: 110 ERLVDVAR 117