Pairwise Alignments

Query, 158 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 879 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score = 47.0 bits (110), Expect = 8e-10
 Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 9/127 (7%)

Query: 6   IICVDDQREVLSAVLQDLEPLSRWINIEDCESADEALELMDDLDAQGEWVAVVISDHVMP 65
           ++ VDD+  +LSA L+ L     ++ I    S  E L+++      G  V V+ISD  MP
Sbjct: 747 LLLVDDEPGILSA-LKRLFRREGYV-ILTANSGKEGLDIL-----AGHDVGVIISDARMP 799

Query: 66  GKSGVELLSEISADPRFIHTKKVLLTGQATHTDTINAINTAGIHHYFDKPWSAKILVDCV 125
              G E L ++ A   +  T +++L+G        +A+N   +  +  KPW    L++ +
Sbjct: 800 EMDGAEFLGKVRA--MYPDTMRIILSGYTDLKAVTSAVNRGELFKFLTKPWDDGELLETI 857

Query: 126 RSLVTHY 132
           R     Y
Sbjct: 858 RDAFRQY 864



 Score = 38.1 bits (87), Expect = 4e-07
 Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 8/122 (6%)

Query: 6   IICVDDQREVLSAVLQDLEPLSRWINIEDCESADEALELMDDLDAQGEWVAVVISDHVMP 65
           ++ VDD +E L+ + + L P     N+    S   AL++ +          +++ D +MP
Sbjct: 19  VLVVDDTKENLTVIGELLNP---HYNVRIANSGQRALKVANSTPVPD----LILLDIMMP 71

Query: 66  GKSGVELLSEISADPRFIHTKKVLLTGQATHTDTINAINTAGIHHYFDKPWSAKILVDCV 125
              G E L+E+ A+P   H   + +T      D    +   G   Y  KP    IL+  +
Sbjct: 72  EMDGYETLAELRANPATRHIPVIFVTALDADEDEERGL-ALGAVDYIAKPIRPAILLGRI 130

Query: 126 RS 127
           R+
Sbjct: 131 RT 132